8.6.79 - Released: 2025-04-16 - Content: 273841 cells
Morphology File (Standardized)
Morphology File (Original)
Log File (Standardized)
Log File (Original)



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NeuroMorpho.Org ID :  NMO_78008
Cell Name :  Im_Ct_13
Archive Name :  Munoz-Cobo
Species Name :  mouse
Strain :  CD1
Structural Domains :  Dendrites, Soma, No Axon
Physical Integrity :  Dendrites Moderate
Morphological Attributes :  Diameter, 2D, Angles
Min Age :  17.5 days
Max Age :  17.5 days
Gender :  Male/Female
Min Weight :  Not reported
Max Weight :  Not reported
Development :  embryonic
Primary Brain Region :  hippocampus
Secondary Brain Region :  Not reported
Tertiary Brain Region :  Not reported
Primary Cell Class :  principal cell
Secondary Cell Class :  pyramidal
Tertiary Cell Class :  Not reported
Original Format :  Neuronstudio.swc
Experiment Protocol :  culture
Experimental Condition :  Control
Staining Method :  green fluorescent protein
Slicing Direction :  Sagittal
Slice Thickness :  0.5  μm
Tissue Shrinkage :  Not reported
Objective Type :  oil
Magnification :  20x
Reconstruction Method :  NeuronStudio
Date of Deposition :  2017-03-10
Date of Upload :  2017-11-28
Persistence Vector :  Im_Ct_13.pvec

Reference Article
Related Article Reference :  Transcriptional Elongation Regulator 1 Affects Transcription and Splicing of Genes Associated with Cellular Morphology and Cytoskeleton Dynamics and IsRequired for Neurite Outgrowth in Neuroblastoma Cells and Primary NeuronalCultures.

Measurements
Soma Surface :  779.41 μm2
Number of Stems :  9
Number of Bifurcations :  96
Number of Branches :  201
Overall Width :  105.65 μm
Overall Height :  178.1 μm
Overall Depth :  2.45 μm
Average Diameter :  0.86 μm
Total Length :  1141.69 μm
Total Surface :  4189.54 μm2
Total Volume :  2472.96 μm3
Max Euclidean Distance :  114.77 μm
Max Path Distance :  122.38 μm
Max Branch Order :  14
Average Contraction :  0.97
Total Fragmentation :  1411
Partition Asymmetry :  0.64
Average Rall's Ratio :  1.27
Average Bifurcation Angle Local :  77.9°
Average Bifurcation Angle Remote :  73.65°
Fractal Dimension :  1.03

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