8.6.82 - Released: 2025-05-21 - Content: 275062 cells
Morphology File (Standardized)
Morphology File (Original)
Log File (Standardized)
Log File (Original)



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Details about selected cell
NeuroMorpho.Org ID :  NMO_243506
Cell Name :  Iba1_Adult_5_03
Archive Name :  Maras_Akil
Species Name :  rat
Strain :  Sprague-Dawley
Structural Domains :  Processes, Soma
Physical Integrity :  Processes Moderate
Morphological Attributes :  Diameter, 3D, Angles
Min Age :  60.0 days
Max Age :  75.0 days
Gender :  Male
Min Weight :  300 grams
Max Weight :  400 grams
Development :  adult
Primary Brain Region :  hippocampus
Secondary Brain Region :  CA1
Tertiary Brain Region :  Not reported
Primary Cell Class :  Glia
Secondary Cell Class :  microglia
Tertiary Cell Class :  Iba1-positive
Original Format :  Neurolucida.asc
Experiment Protocol :  in vitro
Experimental Condition :  Control
Staining Method :  immunostaining
Slicing Direction :  coronal
Slice Thickness :  40  μm
Tissue Shrinkage :  Reported (no values given)
Not corrected
Objective Type :  oil
Magnification :  63x
Reconstruction Method :  Neurolucida
Date of Deposition :  2022-09-30
Date of Upload :  2022-10-25
Persistence Vector :  Iba1_Adult_5_03.pvec
Note :  This reconstruction was obtained from a rat bred for high locomotor scores when placed in a novel environment; highly exploratory with an active coping style that models an "externalizing temperament".

Reference Article
Related Article Reference :  Differences in microglia morphological profiles reflect divergent emotional temperaments: insights from a selective breeding model.

Measurements
Soma Surface :  272.75 μm2
Number of Stems :  6
Number of Bifurcations :  15
Number of Branches :  36
Overall Width :  48.53 μm
Overall Height :  33.4 μm
Overall Depth :  5.55 μm
Average Diameter :  0.61 μm
Total Length :  306.46 μm
Total Surface :  590.11 μm2
Total Volume :  97.24 μm3
Max Euclidean Distance :  33.17 μm
Max Path Distance :  44.03 μm
Max Branch Order :  3
Average Contraction :  0.91
Total Fragmentation :  170
Partition Asymmetry :  0.33
Average Rall's Ratio :  1.56
Average Bifurcation Angle Local :  87.61°
Average Bifurcation Angle Remote :  87.7°
Fractal Dimension :  1.05

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