8.6.79 - Released: 2025-04-16 - Content: 273841 cells
Morphology File (Standardized)
Morphology File (Original)
Log File (Standardized)
Log File (Original)



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NeuroMorpho.Org ID :  NMO_243542
Cell Name :  Iba1_Adult_3b_13
Archive Name :  Maras_Akil
Species Name :  rat
Strain :  Sprague-Dawley
Structural Domains :  Processes, Soma
Physical Integrity :  Processes Moderate
Morphological Attributes :  Diameter, 3D, Angles
Min Age :  60.0 days
Max Age :  75.0 days
Gender :  Male
Min Weight :  300 grams
Max Weight :  400 grams
Development :  adult
Primary Brain Region :  hippocampus
Secondary Brain Region :  CA3
Tertiary Brain Region :  Not reported
Primary Cell Class :  Glia
Secondary Cell Class :  microglia
Tertiary Cell Class :  Iba1-positive
Original Format :  Neurolucida.asc
Experiment Protocol :  in vitro
Experimental Condition :  Control
Staining Method :  immunostaining
Slicing Direction :  coronal
Slice Thickness :  40  μm
Tissue Shrinkage :  Reported (no values given)
Not corrected
Objective Type :  oil
Magnification :  63x
Reconstruction Method :  Neurolucida
Date of Deposition :  2022-09-30
Date of Upload :  2022-10-25
Persistence Vector :  Iba1_Adult_3b_13.pvec
Note :  This reconstruction was obtained from a rat bred for high locomotor scores when placed in a novel environment; highly exploratory with an active coping style that models an "externalizing temperament".

Reference Article
Related Article Reference :  Differences in microglia morphological profiles reflect divergent emotional temperaments: insights from a selective breeding model.

Measurements
Soma Surface :  182.91 μm2
Number of Stems :  3
Number of Bifurcations :  24
Number of Branches :  51
Overall Width :  55.33 μm
Overall Height :  52.15 μm
Overall Depth :  6.05 μm
Average Diameter :  0.56 μm
Total Length :  456.74 μm
Total Surface :  793.42 μm2
Total Volume :  117.78 μm3
Max Euclidean Distance :  42.94 μm
Max Path Distance :  55.12 μm
Max Branch Order :  8
Average Contraction :  0.88
Total Fragmentation :  264
Partition Asymmetry :  0.6
Average Rall's Ratio :  1.65
Average Bifurcation Angle Local :  82.96°
Average Bifurcation Angle Remote :  75.73°
Fractal Dimension :  1.06

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