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| Details about selected cell |
| NeuroMorpho.Org ID : | NMO_93322 |
| Cell Name : | HVC_RA__003-final |
| Archive Name : | Kornfeld |
| Species Name : | zebra finch |
| Strain : | Not reported |
| Structural Domains : | No Dendrites, No Soma, Axon |
| Physical Integrity : | Axon Incomplete |
| Morphological Attributes : | No Diameter, 3D, Angles |
| Min Age : | 90.0 days
|
| Max Age : | 90.0 days
|
| Gender : |
Male
|
| Min Weight : | Not reported
|
| Max Weight : | Not reported
|
| Development : | adult |
| Primary Brain Region : | pallium |
| Secondary Brain Region : | cortex |
| Tertiary Brain Region : | high vocal center |
| Primary Cell Class : | principal cell |
| Secondary Cell Class : | robust nucleus of the arcopallium projecting |
| Tertiary Cell Class : | Not reported |
| Original Format : | Knossos.xml |
| Experiment Protocol : | in vitro |
| Experimental Condition : | Control |
| Staining Method : | Osmium tetraoxide |
| Slicing Direction : | parasagittal |
| Slice Thickness : | 0.029
μm |
| Tissue Shrinkage : |
Not reported
|
| Objective Type : | electron microscopy |
| Magnification : | Not reported
|
| Reconstruction Method : | Knossos |
| Date of Deposition : | 2017-04-28 |
| Date of Upload : | 2018-08-02 |
| Persistence Vector : | HVC_RA__003-final.pvec |
|
|
| Reference Articles |
| Primary Article Reference : | EM connectomics reveals axonal target variation in a sequence-generating network. |
|
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|
| Secondary Article Reference : | Automated synaptic connectivity inference for volume electron microscopy. |
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|
| Measurements |
| Soma Surface : |
N/A |
| Number of Stems : |
1 |
| Number of Bifurcations : |
590 |
| Number of Branches : |
1181 |
| Overall Width : |
88.48 μm |
| Overall Height : |
90.92 μm |
| Overall Depth : |
72.02 μm |
| Average Diameter : |
0.5 μm |
| Total Length : |
2068.57 μm |
| Total Surface : |
3249.3 μm2 |
| Total Volume : |
406.16 μm3 |
| Max Euclidean Distance : |
104.91 μm |
| Max Path Distance : |
168.96 μm |
| Max Branch Order : |
70 |
| Average Contraction : |
0.9 |
| Total Fragmentation : |
10538 |
| Partition Asymmetry : |
0.74 |
| Average Rall's Ratio : |
2 |
| Average Bifurcation Angle Local : |
97.33° |
| Average Bifurcation Angle Remote : |
90.86° |
| Fractal Dimension : |
1.09 |
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