8.6.82 - Released: 2025-05-21 - Content: 275062 cells
Morphology File (Standardized)
Morphology File (Original)
Log File (Standardized)
Log File (Original)



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NeuroMorpho.Org ID :  NMO_10846
Cell Name :  HRP30-003a-finito
Archive Name :  Mena-Segovia
Species Name :  rat
Strain :  Sprague-Dawley
Structural Domains :  Dendrites, Soma, Axon
Physical Integrity :  Dendrites Complete, Axon Moderate
Morphological Attributes :  Diameter, 3D, Angles
Min Age :  Not reported
Max Age :  Not reported
Gender :  Male
Min Weight :  250 grams
Max Weight :  310 grams
Development :  adult
Primary Brain Region :  brainstem
Secondary Brain Region :  pedunculopontine nucleus
Tertiary Brain Region :  Not reported
Primary Cell Class :  principal cell
Secondary Cell Class :  Non-cholinergic
Tertiary Cell Class :  Not reported
Original Format :  Neurolucida.asc
Experiment Protocol :  in vivo
Experimental Condition :  Control
Staining Method :  Neurobiotin
Slicing Direction :  parasagittal
Slice Thickness :  50  μm
Tissue Shrinkage :  Not reported
Objective Type :  Not reported
Magnification :  63x
Reconstruction Method :  Neurolucida
Date of Deposition :  2013-03-19
Date of Upload :  2014-05-30
Persistence Vector :  HRP30-003a-finito.pvec
Note :  Additional reconstruction files of this cell available here.

Reference Article
Related Article Reference :  Distinct types of non-cholinergic pedunculopontine neurons are differentially modulated during global brain states.

Measurements
Soma Surface :  2596.17 μm2
Number of Stems :  7
Number of Bifurcations :  8
Number of Branches :  23
Overall Width :  2071.39 μm
Overall Height :  1878.81 μm
Overall Depth :  166.82 μm
Average Diameter :  0.95 μm
Total Length :  6942.55 μm
Total Surface :  19100.8 μm2
Total Volume :  6027.75 μm3
Max Euclidean Distance :  2184.32 μm
Max Path Distance :  4909.51 μm
Max Branch Order :  3
Average Contraction :  0.9
Total Fragmentation :  3370
Partition Asymmetry :  0.37
Average Rall's Ratio :  1.3
Average Bifurcation Angle Local :  68.81°
Average Bifurcation Angle Remote :  56.9°
Fractal Dimension :  1.02

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