8.6.82 - Released: 2025-05-21 - Content: 275062 cells
Morphology File (Standardized)
Morphology File (Original)
Log File (Standardized)
Log File (Original)



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NeuroMorpho.Org ID :  NMO_191737
Cell Name :  HC_WT-PBS4_24h_a
Archive Name :  Vandenbroucke
Species Name :  mouse
Strain :  C57BL/6
Structural Domains :  Processes, No Soma
Physical Integrity :  Processes Moderate
Morphological Attributes :  No Diameter, 3D, Angles
Min Age :  5.0 months
Max Age :  5.8 months
Gender :  Male/Female
Min Weight :  20 grams
Max Weight :  30 grams
Development :  adult
Primary Brain Region :  hippocampus
Secondary Brain Region :  Not reported
Tertiary Brain Region :  Not reported
Primary Cell Class :  Glia
Secondary Cell Class :  microglia
Tertiary Cell Class :  Iba1-positive
Original Format :  Imaris.ims
Experiment Protocol :  in vitro
Experimental Condition :  Control
Staining Method :  immunostaining
Slicing Direction :  coronal
Slice Thickness :  50  μm
Tissue Shrinkage :  Not reported
Objective Type :  oil
Magnification :  40x
Reconstruction Method :  Imaris
Date of Deposition :  2022-05-06
Date of Upload :  2022-06-29
Persistence Vector :  HC_WT-PBS4_24h_a.pvec
Note :  Control mice received PBS injections performed on days 0 and 7. This reconstruction was obtained 24h after the second PBS injection.

Reference Article
Related Article Reference :  Low-grade peripheral inflammation affects brain pathology in the AppNL-G-Fmouse model of Alzheimer's disease.

Measurements
Soma Surface :  N/A
Number of Stems :  1
Number of Bifurcations :  49
Number of Branches :  99
Overall Width :  44.68 μm
Overall Height :  39.56 μm
Overall Depth :  40.6 μm
Average Diameter :  1 μm
Total Length :  765.71 μm
Total Surface :  2413.47 μm2
Total Volume :  605.77 μm3
Max Euclidean Distance :  51.94 μm
Max Path Distance :  104.45 μm
Max Branch Order :  12
Average Contraction :  0.9
Total Fragmentation :  2399
Partition Asymmetry :  0.49
Average Rall's Ratio :  2.01
Average Bifurcation Angle Local :  21.03°
Average Bifurcation Angle Remote :  74.25°
Fractal Dimension :  1.04

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