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| Details about selected cell |
| NeuroMorpho.Org ID : | NMO_177442 |
| Cell Name : | H236_neuron8_reg |
| Archive Name : | Guo |
| Species Name : | mouse |
| Strain : | C57BL/6J |
| Structural Domains : | Dendrites, Soma, Axon |
| Physical Integrity : | Dendrites & Axon Moderate |
| Morphological Attributes : | No Diameter, 3D, Angles |
| Min Age : | 2.0 months
|
| Max Age : | 2.0 months
|
| Gender : |
Male
|
| Min Weight : | Not reported
|
| Max Weight : | Not reported
|
| Development : | adult |
| Primary Brain Region : | neocortex |
| Secondary Brain Region : | frontal |
| Tertiary Brain Region : | secondary motor, layer 5, anterior lateral |
| Primary Cell Class : | principal cell |
| Secondary Cell Class : | pyramidal |
| Tertiary Cell Class : | pyramidal tract (PT) cell Sim1+ |
| Original Format : | Vaa3D.swc |
| Experiment Protocol : | in vivo |
| Experimental Condition : | Control |
| Staining Method : | AAV + eGFP |
| Slicing Direction : | horizontal |
| Slice Thickness : | 1
μm |
| Tissue Shrinkage : |
Not reported
|
| Objective Type : | oil |
| Magnification : | 40x |
| Reconstruction Method : | Vaa3D |
| Date of Deposition : | 2021-11-16 |
| Date of Upload : | 2022-02-11 |
| Persistence Vector : | H236_neuron8_reg.pvec |
| Note : | To achieve sparse labeling of a few dozens of cortical neurons, a mixture of AAV2/1-hSyn-Cre and AAV2/1-CAG-Flex-EGFP was injected. The viral mixture was delivered through an oil hydraulic micromanipulator (Narishige, MO-10, 17 nL/min for 50 nL) into ALM (AP: +2.5, ML: 1.5, DV: 0.7). Each mouse was injected unilaterally and maintained for 5 weeks to allow stable and strong expression of EGFP. |
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| Reference Article |
| Related Article Reference : | Sparse imaging and reconstruction tomography for high-speed high-resolution whole-brain imaging |
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| Measurements |
| Soma Surface : |
2644.16 μm2 |
| Number of Stems : |
11 |
| Number of Bifurcations : |
316 |
| Number of Branches : |
643 |
| Overall Width : |
4555.15 μm |
| Overall Height : |
6066.52 μm |
| Overall Depth : |
7092.55 μm |
| Average Diameter : |
2 μm |
| Total Length : |
91353.9 μm |
| Total Surface : |
573993 μm2 |
| Total Volume : |
286997 μm3 |
| Max Euclidean Distance : |
8243.92 μm |
| Max Path Distance : |
12534.9 μm |
| Max Branch Order : |
25 |
| Average Contraction : |
0.92 |
| Total Fragmentation : |
4476 |
| Partition Asymmetry : |
0.63 |
| Average Rall's Ratio : |
2 |
| Average Bifurcation Angle Local : |
77.27° |
| Average Bifurcation Angle Remote : |
73.82° |
| Fractal Dimension : |
1.02 |
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