8.6.79 - Released: 2025-04-16 - Content: 273841 cells
Morphology File (Standardized)
Morphology File (Original)
Log File (Standardized)
Log File (Original)



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NeuroMorpho.Org ID :  NMO_06183
Cell Name :  GranuleCell-Nr5
Archive Name :  Vuksic
Species Name :  mouse
Strain :  C57BL6/Thy1-GFP
Structural Domains :  Dendrites, Soma, Axon
Physical Integrity :  Dendrites Complete, Axon Incomplete
Morphological Attributes :  Diameter, 3D, Angles
Min Age :  3.0 months
Max Age :  4.0 months
Gender :  Male
Min Weight :  Not reported
Max Weight :  Not reported
Development :  not reported
Primary Brain Region :  hippocampus
Secondary Brain Region :  dentate gyrus
Tertiary Brain Region :  Not reported
Primary Cell Class :  principal cell
Secondary Cell Class :  granule
Tertiary Cell Class :  Not reported
Original Format :  Neurolucida.nrx
Experiment Protocol :  in vitro
Experimental Condition :  Control
Staining Method :  green fluorescent protein
Slicing Direction :  Not reported
Slice Thickness :  100  μm
Tissue Shrinkage :  Not reported
Objective Type :  Not reported
Magnification :  Not reported
Reconstruction Method :  Neurolucida
Date of Deposition :  2009-12-17
Date of Upload :  2011-03-10
Persistence Vector :  GranuleCell-Nr5.pvec
Note :  Dorsal hippocampus-temporal part

Reference Article
Related Article Reference :  3D-reconstruction and functional properties of GFP-positive and GFP-negative granule cells in the fascia dentata of the Thy1-GFP mouse.

Measurements
Soma Surface :  410.26 μm2
Number of Stems :  2
Number of Bifurcations :  14
Number of Branches :  30
Overall Width :  167.36 μm
Overall Height :  222.49 μm
Overall Depth :  65.7 μm
Average Diameter :  1.22 μm
Total Length :  2157.76 μm
Total Surface :  8363.94 μm2
Total Volume :  2687.39 μm3
Max Euclidean Distance :  235.08 μm
Max Path Distance :  252.77 μm
Max Branch Order :  5
Average Contraction :  0.94
Total Fragmentation :  1666
Partition Asymmetry :  0.33
Average Rall's Ratio :  1.53
Average Bifurcation Angle Local :  56.45°
Average Bifurcation Angle Remote :  33.45°
Fractal Dimension :  1.02

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