8.6.79 - Released: 2025-04-16 - Content: 273841 cells
Morphology File (Standardized)
Morphology File (Original)
Log File (Standardized)
Log File (Original)



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NeuroMorpho.Org ID :  NMO_06172
Cell Name :  GranuleCell-Nr1
Archive Name :  Vuksic
Species Name :  mouse
Strain :  C57BL6/Thy1-GFP
Structural Domains :  Dendrites, Soma, Axon
Physical Integrity :  Dendrites Complete, Axon Incomplete
Morphological Attributes :  Diameter, 3D, Angles
Min Age :  3.0 months
Max Age :  4.0 months
Gender :  Male
Min Weight :  Not reported
Max Weight :  Not reported
Development :  not reported
Primary Brain Region :  hippocampus
Secondary Brain Region :  dentate gyrus
Tertiary Brain Region :  Not reported
Primary Cell Class :  principal cell
Secondary Cell Class :  granule
Tertiary Cell Class :  Not reported
Original Format :  Neurolucida.nrx
Experiment Protocol :  in vitro
Experimental Condition :  Control
Staining Method :  green fluorescent protein
Slicing Direction :  Not reported
Slice Thickness :  100  μm
Tissue Shrinkage :  Not reported
Objective Type :  Not reported
Magnification :  Not reported
Reconstruction Method :  Neurolucida
Date of Deposition :  2009-12-17
Date of Upload :  2011-03-10
Persistence Vector :  GranuleCell-Nr1.pvec

Reference Article
Related Article Reference :  3D-reconstruction and functional properties of GFP-positive and GFP-negative granule cells in the fascia dentata of the Thy1-GFP mouse.

Measurements
Soma Surface :  405.4 μm2
Number of Stems :  2
Number of Bifurcations :  17
Number of Branches :  36
Overall Width :  144.13 μm
Overall Height :  227.16 μm
Overall Depth :  49.49 μm
Average Diameter :  1 μm
Total Length :  2403.85 μm
Total Surface :  7640.73 μm2
Total Volume :  2100.69 μm3
Max Euclidean Distance :  227.99 μm
Max Path Distance :  264.38 μm
Max Branch Order :  6
Average Contraction :  0.91
Total Fragmentation :  3339
Partition Asymmetry :  0.31
Average Rall's Ratio :  1.43
Average Bifurcation Angle Local :  68.43°
Average Bifurcation Angle Remote :  32.11°
Fractal Dimension :  1.03

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