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| Details about selected cell |
| NeuroMorpho.Org ID : | NMO_141528 |
| Cell Name : | Fish003a_yellow |
| Archive Name : | Ma_Pan |
| Species Name : | zebrafish |
| Strain : | Nacre |
| Structural Domains : | No Dendrites, No Soma, Axon |
| Physical Integrity : | Axon Moderate |
| Morphological Attributes : | Diameter, 3D, Angles |
| Min Age : | 0.0 day
|
| Max Age : | 9.0 days
|
| Gender : |
Male/Female
|
| Min Weight : | Not reported
|
| Max Weight : | Not reported
|
| Development : | embryonic |
| Primary Brain Region : | retinorecipient mesencephalon and diencephalon |
| Secondary Brain Region : | left |
| Tertiary Brain Region : | Not reported |
| Primary Cell Class : | principal cell |
| Secondary Cell Class : | Contralateral projecting |
| Tertiary Cell Class : | Not reported |
| Original Format : | Simple Neurite Tracer.swc |
| Experiment Protocol : | in vitro |
| Experimental Condition : | Control |
| Staining Method : | red fluorescent protein |
| Slicing Direction : | Not applicable |
| Slice Thickness : | Not applicable
|
| Tissue Shrinkage : |
Not reported
|
| Objective Type : | water |
| Magnification : | 25x |
| Reconstruction Method : | Simple Neurite Tracer |
| Date of Deposition : | 2020-07-24 |
| Date of Upload : | 2020-10-15 |
| Persistence Vector : | Fish003a_yellow.pvec |
| Note : | TRAS-labeling, wild-type cohort. This cell is positive to neuronal-localized nuclear GCaMP6f and VSV(Delta)G |
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| Reference Article |
| Related Article Reference : | Structural Neural Connectivity Analysis in Zebrafish With Restricted Anterograde Transneuronal Viral Labeling and Quantitative Brain Mapping. |
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| Measurements |
| Soma Surface : |
N/A |
| Number of Stems : |
2 |
| Number of Bifurcations : |
1 |
| Number of Branches : |
4 |
| Overall Width : |
8.92 μm |
| Overall Height : |
64.44 μm |
| Overall Depth : |
31 μm |
| Average Diameter : |
2.4 μm |
| Total Length : |
156.31 μm |
| Total Surface : |
1178.54 μm2 |
| Total Volume : |
707.13 μm3 |
| Max Euclidean Distance : |
64.05 μm |
| Max Path Distance : |
75.75 μm |
| Max Branch Order : |
2 |
| Average Contraction : |
0.92 |
| Total Fragmentation : |
41 |
| Partition Asymmetry : |
0.5 |
| Average Rall's Ratio : |
2 |
| Average Bifurcation Angle Local : |
89.87° |
| Average Bifurcation Angle Remote : |
143.22° |
| Fractal Dimension : |
1.05 |
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