8.6.82 - Released: 2025-05-21 - Content: 275062 cells
Morphology File (Standardized)
Morphology File (Original)
Log File (Standardized)
Log File (Original)



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NeuroMorpho.Org ID :  NMO_283349
Cell Name :  Exp230-Nala-Section-2_2-Reconstruction-1
Archive Name :  H_Zhang
Species Name :  mouse
Strain :  Shank3 R1117X+/+;B6.Cg-Tg(Thy1-YFP)HJrs/J
Structural Domains :  Dendrites, Soma, No Axon
Physical Integrity :  Dendrites Complete
Morphological Attributes :  No Diameter, 3D, Angles
Min Age :  3.0 months
Max Age :  6.0 months
Gender :  Male/Female
Min Weight :  Not reported
Max Weight :  Not reported
Development :  adult
Primary Brain Region :  neocortex
Secondary Brain Region :  frontal
Tertiary Brain Region :  association cortex, layer 5
Primary Cell Class :  principal cell
Secondary Cell Class :  pyramidal
Tertiary Cell Class :  Not reported
Original Format :  Neurolucida.dat
Experiment Protocol :  ex vivo
Experimental Condition :  R1117X knockin
Staining Method :  yellow fluorescent protein
Slicing Direction :  coronal
Slice Thickness :  Not reported
Tissue Shrinkage :  Not reported
Objective Type :  water
Magnification :  25x
Reconstruction Method :  Neurolucida
Date of Deposition :  2024-06-17
Date of Upload :  2024-07-10
Persistence Vector :  Exp230-Nala-Section-2_2-Reconstruction-1.pvec

Reference Article
Related Article Reference :  SHANK3 Mutations Associated with Autism and Schizophrenia Lead to Shared and Distinct Changes in Dendritic Spine Dynamics in the Developing Mouse Brain.

Measurements
Soma Surface :  4879.42 μm2
Number of Stems :  7
Number of Bifurcations :  23
Number of Branches :  53
Overall Width :  441.67 μm
Overall Height :  537.21 μm
Overall Depth :  122.79 μm
Average Diameter :  2.86 μm
Total Length :  3690.85 μm
Total Surface :  33727.1 μm2
Total Volume :  27741.2 μm3
Max Euclidean Distance :  478.71 μm
Max Path Distance :  573.69 μm
Max Branch Order :  8
Average Contraction :  0.95
Total Fragmentation :  406
Partition Asymmetry :  0.47
Average Rall's Ratio :  1.59
Average Bifurcation Angle Local :  67.02°
Average Bifurcation Angle Remote :  60.03°
Fractal Dimension :  1.01

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