8.6.82 - Released: 2025-05-21 - Content: 275062 cells
Morphology File (Standardized)
Morphology File (Original)
Log File (Standardized)
Log File (Original)



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NeuroMorpho.Org ID :  NMO_283371
Cell Name :  Exp230-Nala-Section-2_1-Reconstruction-3
Archive Name :  H_Zhang
Species Name :  mouse
Strain :  Shank3 R1117X+/+;B6.Cg-Tg(Thy1-YFP)HJrs/J
Structural Domains :  Dendrites, Soma, No Axon
Physical Integrity :  Dendrites Complete
Morphological Attributes :  No Diameter, 3D, Angles
Min Age :  3.0 months
Max Age :  6.0 months
Gender :  Male/Female
Min Weight :  Not reported
Max Weight :  Not reported
Development :  adult
Primary Brain Region :  neocortex
Secondary Brain Region :  frontal
Tertiary Brain Region :  association cortex, layer 5
Primary Cell Class :  principal cell
Secondary Cell Class :  pyramidal
Tertiary Cell Class :  Not reported
Original Format :  Neurolucida.dat
Experiment Protocol :  ex vivo
Experimental Condition :  R1117X knockin
Staining Method :  yellow fluorescent protein
Slicing Direction :  coronal
Slice Thickness :  Not reported
Tissue Shrinkage :  Not reported
Objective Type :  water
Magnification :  25x
Reconstruction Method :  Neurolucida
Date of Deposition :  2024-06-17
Date of Upload :  2024-07-10
Persistence Vector :  Exp230-Nala-Section-2_1-Reconstruction-3.pvec

Reference Article
Related Article Reference :  SHANK3 Mutations Associated with Autism and Schizophrenia Lead to Shared and Distinct Changes in Dendritic Spine Dynamics in the Developing Mouse Brain.

Measurements
Soma Surface :  2318.96 μm2
Number of Stems :  6
Number of Bifurcations :  24
Number of Branches :  54
Overall Width :  318.04 μm
Overall Height :  389.75 μm
Overall Depth :  63.67 μm
Average Diameter :  2.57 μm
Total Length :  3576.36 μm
Total Surface :  29042.4 μm2
Total Volume :  19216.5 μm3
Max Euclidean Distance :  298.25 μm
Max Path Distance :  319.74 μm
Max Branch Order :  4
Average Contraction :  0.92
Total Fragmentation :  823
Partition Asymmetry :  0.45
Average Rall's Ratio :  2.13
Average Bifurcation Angle Local :  71.06°
Average Bifurcation Angle Remote :  58.01°
Fractal Dimension :  1.02

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