8.6.79 - Released: 2025-04-16 - Content: 273841 cells
Morphology File (Standardized)
Morphology File (Original)
Log File (Standardized)
Log File (Original)



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Details about selected cell
NeuroMorpho.Org ID :  NMO_171600
Cell Name :  Estriado-110TDE_cell1
Archive Name :  Summavielle
Species Name :  mouse
Strain :  C57BL/6
Structural Domains :  Processes, No Soma
Physical Integrity :  Processes Complete
Morphological Attributes :  Diameter, 3D, Angles
Min Age :  60.0 days
Max Age :  65.0 days
Gender :  Male
Min Weight :  24 grams
Max Weight :  26 grams
Development :  adult
Primary Brain Region :  basal ganglia
Secondary Brain Region :  striatum
Tertiary Brain Region :  Putamen
Primary Cell Class :  Glia
Secondary Cell Class :  microglia
Tertiary Cell Class :  Iba1-positive
Original Format :  Imaris.hoc
Experiment Protocol :  in vitro
Experimental Condition :  Methamphetamine binge
Staining Method :  immunostaining
Slicing Direction :  coronal
Slice Thickness :  30  μm
Tissue Shrinkage :  Not reported
Objective Type :  oil
Magnification :  63x
Reconstruction Method :  Imaris
Date of Deposition :  2021-12-14
Date of Upload :  2022-01-03
Persistence Vector :  Estriado-110TDE_cell1.pvec
Note :  The SWC units for this cell are expressed in pixels rather than in microns. Thus, the morphometric measurements can be compared within other cells within this archive, but not across the rest of the database.

Reference Article
Related Article Reference :  Astrocyte-derived TNF and glutamate critically modulate microglia activation by methamphetamine.

Measurements
Soma Surface :  N/A
Number of Stems :  1
Number of Bifurcations :  42
Number of Branches :  85
Overall Width :  12.71 μm
Overall Height :  55.8 μm
Overall Depth :  45.64 μm
Average Diameter :  0.45 μm
Total Length :  472.16 μm
Total Surface :  662 μm2
Total Volume :  79.05 μm3
Max Euclidean Distance :  36.95 μm
Max Path Distance :  63.14 μm
Max Branch Order :  13
Average Contraction :  0.87
Total Fragmentation :  3800
Partition Asymmetry :  0.65
Average Rall's Ratio :  2.17
Average Bifurcation Angle Local :  32.26°
Average Bifurcation Angle Remote :  88.47°
Fractal Dimension :  1.05

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