8.6.82 - Released: 2025-05-21 - Content: 275062 cells
Morphology File (Standardized)
Morphology File (Original)
Log File (Standardized)
Log File (Original)



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NeuroMorpho.Org ID :  NMO_239172
Cell Name :  EE9-Young-MM_Sec1cel3ae9jmm
Archive Name :  Diniz
Species Name :  mouse
Strain :  Not reported
Structural Domains :  Processes, Soma
Physical Integrity :  Processes Complete
Morphological Attributes :  No Diameter, 3D, Angles
Min Age :  Not reported
Max Age :  Not reported
Gender :  Not reported
Min Weight :  Not reported
Max Weight :  Not reported
Development :  young
Primary Brain Region :  hippocampus
Secondary Brain Region :  dentate gyrus
Tertiary Brain Region :  Not reported
Primary Cell Class :  Glia
Secondary Cell Class :  microglia
Tertiary Cell Class :  Iba1-positive
Original Format :  Neurolucida.dat
Experiment Protocol :  in vitro
Experimental Condition :  Environmental enrichment
Staining Method :  immunostaining
Slicing Direction :  coronal
Slice Thickness :  100  μm
Tissue Shrinkage :  Reported (no values given)
Corrected 1.75% in z
Objective Type :  oil
Magnification :  100x
Reconstruction Method :  Neurolucida
Date of Deposition :  2022-07-22
Date of Upload :  2022-09-29
Persistence Vector :  EE9-Young-MM_Sec1cel3ae9jmm.pvec

Reference Article
Related Article Reference :  Microglial Morphology Across Distantly Related Species: Phylogenetic, Environmental and Age Influences on Microglia Reactivity and Surveillance States.

Measurements
Soma Surface :  134 μm2
Number of Stems :  7
Number of Bifurcations :  273
Number of Branches :  553
Overall Width :  60.57 μm
Overall Height :  39.39 μm
Overall Depth :  13.53 μm
Average Diameter :  0.49 μm
Total Length :  1724.59 μm
Total Surface :  2935.29 μm2
Total Volume :  522.65 μm3
Max Euclidean Distance :  45.67 μm
Max Path Distance :  97.41 μm
Max Branch Order :  20
Average Contraction :  0.84
Total Fragmentation :  2295
Partition Asymmetry :  0.6
Average Rall's Ratio :  1.73
Average Bifurcation Angle Local :  83.3°
Average Bifurcation Angle Remote :  86.03°
Fractal Dimension :  1.14

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