8.6.79 - Released: 2025-04-16 - Content: 273841 cells
Morphology File (Standardized)
Morphology File (Original)
Log File (Standardized)
Log File (Original)



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NeuroMorpho.Org ID :  NMO_126054
Cell Name :  E247-Control-3-final
Archive Name :  Hyunsoo
Species Name :  mouse
Strain :  Ppp1r2-Cre::RTM
Structural Domains :  Neurites, Soma
Physical Integrity :  Neurites Complete
Morphological Attributes :  Diameter, 3D, Angles
Min Age :  120.0 days
Max Age :  140.0 days
Gender :  Male
Min Weight :  25 grams
Max Weight :  30 grams
Development :  adult
Primary Brain Region :  neocortex
Secondary Brain Region :  medial prefrontal
Tertiary Brain Region :  layer 5
Primary Cell Class :  interneuron
Secondary Cell Class :  GABAergic
Tertiary Cell Class :  Parvalbumin (PV)-positive
Original Format :  neuTube.swc
Experiment Protocol :  in vivo
Experimental Condition :  Control
Staining Method :  Biocytin, streptavidin-488
Slicing Direction :  coronal
Slice Thickness :  300  μm
Tissue Shrinkage :  Not reported
Objective Type :  oil
Magnification :  63x
Reconstruction Method :  neuTube
Date of Deposition :  2019-12-27
Date of Upload :  2020-06-29
Persistence Vector :  E247-Control-3-final.pvec
Note :  Neuron located close to the surface (within approximately 50 microns) and imaged up to 100 microns from the surface. The somatic region included both prelimbic and infralimbic areas. The layer assignment and PV expression are putative.

Reference Article
Related Article Reference :  Postnatal TrkB ablation in corticolimbic interneurons induces social dominance in male mice.

Measurements
Soma Surface :  2635.41 μm2
Number of Stems :  11
Number of Bifurcations :  34
Number of Branches :  79
Overall Width :  114.1 μm
Overall Height :  845.35 μm
Overall Depth :  684.58 μm
Average Diameter :  2.9 μm
Total Length :  11225.6 μm
Total Surface :  103309 μm2
Total Volume :  80557.2 μm3
Max Euclidean Distance :  656.57 μm
Max Path Distance :  728.91 μm
Max Branch Order :  6
Average Contraction :  0.93
Total Fragmentation :  2131
Partition Asymmetry :  0.39
Average Rall's Ratio :  2.21
Average Bifurcation Angle Local :  65.28°
Average Bifurcation Angle Remote :  70.76°
Fractal Dimension :  1.01

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