8.6.96 - Released: 2025-11-05 - Content: 284158 cells
Morphology File (Standardized)
Morphology File (Original)
Log File (Standardized)
Log File (Original)



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NeuroMorpho.Org ID :  NMO_01000
Cell Name :  DS3_030701
Archive Name :  Staiger
Species Name :  rat
Strain :  Wistar
Structural Domains :  Dendrites, Soma, Axon
Physical Integrity :  Dendrites & Axon Moderate
Morphological Attributes :  No Diameter, 3D, Angles
Min Age :  19.0 days
Max Age :  21.0 days
Gender :  Male
Min Weight :  Not reported
Max Weight :  Not reported
Development :  young
Primary Brain Region :  neocortex
Secondary Brain Region :  somatosensory
Tertiary Brain Region :  barrel, layer 4
Primary Cell Class :  principal cell
Secondary Cell Class :  stellate
Tertiary Cell Class :  Spiny
Original Format :  Neurolucida.asc
Experiment Protocol :  in vitro
Experimental Condition :  Control
Staining Method :  biocytin
Slicing Direction :  coronal
Slice Thickness :  100  μm
Tissue Shrinkage :  Reported (no values given)
Not corrected
Objective Type :  water
Magnification :  40x
Reconstruction Method :  Neurolucida
Date of Deposition :  2005-12-31
Date of Upload :  2006-09-02
Persistence Vector :  DS3_030701.pvec
Note :  When originally released, this reconstruction had been incompletely processed, and this issue was fixed in release 6.1 (May 2015). The pre-6.1 version of the processed file is available for download here.
As of January 2015, we became aware that the database contained an additional reconstruction file of this same neuron, named DS3_030701_wL. The latter reconstruction is no longer available as an individual entry since version 6.2. The original files are still available for download here. For any question or clarification, please contact us.

Reference Article
Related Article Reference :  Functional diversity of layer IV spiny neurons in rat somatosensory cortex: quantitative morphology of electrophysiologically characterized and biocytin labeled cells.

Measurements
Soma Surface :  719.61 μm2
Number of Stems :  5
Number of Bifurcations :  78
Number of Branches :  161
Overall Width :  637.23 μm
Overall Height :  1101.34 μm
Overall Depth :  43.54 μm
Average Diameter :  0.39 μm
Total Length :  16972.2 μm
Total Surface :  16343.4 μm2
Total Volume :  4565.4 μm3
Max Euclidean Distance :  1168.6 μm
Max Path Distance :  1250.32 μm
Max Branch Order :  16
Average Contraction :  0.84
Total Fragmentation :  5076
Partition Asymmetry :  0.52
Average Rall's Ratio :  1.77
Average Bifurcation Angle Local :  76.87°
Average Bifurcation Angle Remote :  57.49°
Fractal Dimension :  1.04

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