8.6.82 - Released: 2025-05-21 - Content: 275062 cells
Morphology File (Standardized)
Morphology File (Original)
Log File (Standardized)
Log File (Original)



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NeuroMorpho.Org ID :  NMO_00982
Cell Name :  DS1_160501
Archive Name :  Staiger
Species Name :  rat
Strain :  Wistar
Structural Domains :  Dendrites, Soma, No Axon
Physical Integrity :  Dendrites Moderate
Morphological Attributes :  Diameter, 3D, Angles
Min Age :  18.0 days
Max Age :  22.0 days
Gender :  Male
Min Weight :  Not reported
Max Weight :  Not reported
Development :  young
Primary Brain Region :  neocortex
Secondary Brain Region :  somatosensory
Tertiary Brain Region :  barrel, layer 4
Primary Cell Class :  principal cell
Secondary Cell Class :  stellate
Tertiary Cell Class :  Spiny
Original Format :  Neurolucida.asc
Experiment Protocol :  in vitro
Experimental Condition :  Control
Staining Method :  biocytin
Slicing Direction :  coronal
Slice Thickness :  300  μm
Tissue Shrinkage :  Reported (no values given)
Not corrected
Objective Type :  water
Magnification :  40x
Reconstruction Method :  Neurolucida
Date of Deposition :  2005-12-31
Date of Upload :  2006-09-02
Persistence Vector :  DS1_160501.pvec
Note :  When originally released, this reconstruction had been incompletely processed, and this issue was fixed in release 6.1 (May 2015). The pre-6.1 version of the processed file is available for download here.

Reference Article
Related Article Reference :  Cell Type-Specific Circuits of Cortical Layer IV Spiny Neurons

Measurements
Soma Surface :  442.59 μm2
Number of Stems :  4
Number of Bifurcations :  17
Number of Branches :  38
Overall Width :  129.4 μm
Overall Height :  136.12 μm
Overall Depth :  112.85 μm
Average Diameter :  0.66 μm
Total Length :  2160.4 μm
Total Surface :  4794.22 μm2
Total Volume :  2083.78 μm3
Max Euclidean Distance :  148.19 μm
Max Path Distance :  192.66 μm
Max Branch Order :  4
Average Contraction :  0.74
Total Fragmentation :  929
Partition Asymmetry :  0.54
Average Rall's Ratio :  1.65
Average Bifurcation Angle Local :  80.04°
Average Bifurcation Angle Remote :  52.43°
Fractal Dimension :  1.07

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