8.6.79 - Released: 2025-04-16 - Content: 273841 cells
Morphology File (Standardized)
Morphology File (Original)
Log File (Standardized)
Log File (Original)



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Details about selected cell
NeuroMorpho.Org ID :  NMO_102743
Cell Name :  DNMT3A-KO20
Archive Name :  Ortega
Species Name :  human
Strain :  Not applicable
Structural Domains :  Dendrites, No Soma, No Axon
Physical Integrity :  Dendrites Moderate
Morphological Attributes :  No Diameter, 2D, Angles
Min Age :  Not reported
Max Age :  Not reported
Gender :  Male
Min Weight :  Not reported
Max Weight :  Not reported
Development :  not reported
Primary Brain Region :  spinal cord
Secondary Brain Region :  ventral
Tertiary Brain Region :  Not reported
Primary Cell Class :  principal cell
Secondary Cell Class :  Motoneuron
Tertiary Cell Class :  iPSC-derived
Original Format :  Simple Neurite Tracer.traces
Experiment Protocol :  culture
Experimental Condition :  DNMT3A-KO
Staining Method :  Texas Red dextran
Slicing Direction :  Not applicable
Slice Thickness :  Not reported
Tissue Shrinkage :  Not reported
Objective Type :  water
Magnification :  40x
Reconstruction Method :  Simple Neurite Tracer
Date of Deposition :  2018-11-30
Date of Upload :  2019-04-08
Persistence Vector :  DNMT3A-KO20.pvec
Note :  Motor neurons derived from ESCs (40-50 days in culture)

Reference Article
Related Article Reference :  Dissecting the Functional Consequences of De Novo DNA Methylation Dynamics in Human Motor Neuron Differentiation and Physiology.

Measurements
Soma Surface :  N/A
Number of Stems :  1
Number of Bifurcations :  47
Number of Branches :  95
Overall Width :  167.41 μm
Overall Height :  253.3 μm
Overall Depth :  0 μm
Average Diameter :  0.25 μm
Total Length :  2028.38 μm
Total Surface :  1593.08 μm2
Total Volume :  99.57 μm3
Max Euclidean Distance :  301.42 μm
Max Path Distance :  355.1 μm
Max Branch Order :  21
Average Contraction :  0.91
Total Fragmentation :  5742
Partition Asymmetry :  0.66
Average Rall's Ratio :  2
Average Bifurcation Angle Local :  50.4°
Average Bifurcation Angle Remote :  73.26°
Fractal Dimension :  1.04

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