8.6.79 - Released: 2025-04-16 - Content: 273841 cells
Morphology File (Standardized)
Morphology File (Original)
Log File (Standardized)
Log File (Original)



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NeuroMorpho.Org ID :  NMO_136341
Cell Name :  DNHIF_161021_5-Exp
Archive Name :  Soriano
Species Name :  rat
Strain :  Sprague-Dawley
Structural Domains :  Dendrites, Soma, Axon
Physical Integrity :  Dendrites & Axon Complete
Morphological Attributes :  No Diameter, 2D, Angles
Min Age :  19.5 days
Max Age :  20.5 days
Gender :  Not reported
Min Weight :  Not reported
Max Weight :  Not reported
Development :  embryonic
Primary Brain Region :  neocortex
Secondary Brain Region :  Not reported
Tertiary Brain Region :  Not reported
Primary Cell Class :  principal cell
Secondary Cell Class :  Not reported
Tertiary Cell Class :  Not reported
Original Format :  Simple Neurite Tracer.traces
Experiment Protocol :  culture
Experimental Condition :  Dominant-negative hypoxia-inducible factor (dnHIF)
Staining Method :  green fluorescent protein, immunostaining
Slicing Direction :  Not applicable
Slice Thickness :  Not applicable
Tissue Shrinkage :  Not reported
Objective Type :  dry
Magnification :  4x
Reconstruction Method :  Simple Neurite Tracer
Date of Deposition :  2020-03-24
Date of Upload :  2020-08-10
Persistence Vector :  DNHIF_161021_5-Exp.pvec
Note :  Reconstructions are from immature neurons transfected with GFP-expressing plasmids plus the expression of dominant-negative HIF-1 alpha.

Reference Article
Related Article Reference :  Synaptic activity-induced glycolysis facilitates membrane lipid provision and neurite outgrowth.

Measurements
Soma Surface :  7647.69 μm2
Number of Stems :  2
Number of Bifurcations :  15
Number of Branches :  32
Overall Width :  960.58 μm
Overall Height :  1263.86 μm
Overall Depth :  0 μm
Average Diameter :  0.25 μm
Total Length :  5946.41 μm
Total Surface :  4670.3 μm2
Total Volume :  291.89 μm3
Max Euclidean Distance :  1145.91 μm
Max Path Distance :  1350.32 μm
Max Branch Order :  10
Average Contraction :  0.92
Total Fragmentation :  3239
Partition Asymmetry :  0.73
Average Rall's Ratio :  2
Average Bifurcation Angle Local :  45.74°
Average Bifurcation Angle Remote :  70.87°
Fractal Dimension :  1.02

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