8.6.103 - Released: 2025-12-08 - Content: 285900 cells
Morphology File (Standardized)
Morphology File (Original)
Log File (Standardized)
Log File (Original)



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NeuroMorpho.Org ID :  NMO_307538
Cell Name :  DF_SM230308_02_AMd_c_001_Left
Archive Name :  Dong
Species Name :  mouse
Strain :  (C57BL/6-Gt(ROSA)26Sortm3(CAG-sfGFP)Xwy/J)
Structural Domains :  Dendrites, Soma, No Axon
Physical Integrity :  Dendrites Complete
Morphological Attributes :  Diameter, 3D, Angles
Min Age :  56.0 days
Max Age :  56.0 days
Gender :  Male/Female
Min Weight :  Not reported
Max Weight :  Not reported
Development :  adult
Primary Brain Region :  thalamus
Secondary Brain Region :  Anteromedial nucleus
Tertiary Brain Region :  dorsal, left, Core
Primary Cell Class :  principal cell
Secondary Cell Class :  non-pyramidal
Tertiary Cell Class :  Not reported
Original Format :  Fast Neurite Tracer.swc
Experiment Protocol :  in vitro
Experimental Condition :  Control
Staining Method :  immunostaining
Slicing Direction :  Multiple
Slice Thickness :  300, 400  μm
Tissue Shrinkage :  Not reported
Objective Type :  dry
Magnification :  15x
Reconstruction Method :  Fast Neurite Tracer
Date of Deposition :  2025-11-07
Date of Upload :  2025-12-03
Persistence Vector :  DF_SM230308_02_AMd_c_001_Left.pvec
Note :  These reconstructions were obtained with Olympus Dragonfly spinning disk confocal imaging.

Reference Article
Related Article Reference :  Distinct subnetworks of the mouse anterior thalamic nuclei.

Measurements
Soma Surface :  1188.11 μm2
Number of Stems :  10
Number of Bifurcations :  62
Number of Branches :  134
Overall Width :  170.79 μm
Overall Height :  284.68 μm
Overall Depth :  103.7 μm
Average Diameter :  0.6 μm
Total Length :  8826.78 μm
Total Surface :  16638.1 μm2
Total Volume :  2495.71 μm3
Max Euclidean Distance :  194.67 μm
Max Path Distance :  267.39 μm
Max Branch Order :  7
Average Contraction :  0.77
Total Fragmentation :  6945
Partition Asymmetry :  0.43
Average Rall's Ratio :  2
Average Bifurcation Angle Local :  93.49°
Average Bifurcation Angle Remote :  74.96°
Fractal Dimension :  1.08

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