|
| Details about selected cell |
| NeuroMorpho.Org ID : | NMO_110998 |
| Cell Name : | DEFiNE-Processed_J521_CA1 |
| Archive Name : | Jensen |
| Species Name : | mouse |
| Strain : | En1::2ADre;Dbh::Flpo;RC::RFLTG |
| Structural Domains : | No Dendrites, No Soma, Axon |
| Physical Integrity : | Axon Incomplete |
| Morphological Attributes : | No Diameter, 2D, Angles |
| Min Age : | Not reported
|
| Max Age : | Not reported
|
| Gender : |
Female
|
| Min Weight : | Not reported
|
| Max Weight : | Not reported
|
| Development : | adult |
| Primary Brain Region : | pons |
| Secondary Brain Region : | pontine tegmentum |
| Tertiary Brain Region : | Locus Coeruleus |
| Primary Cell Class : | principal cell |
| Secondary Cell Class : | Noradrenergic |
| Tertiary Cell Class : | CA1-projecting |
| Original Format : | NeuronJ.ndf |
| Experiment Protocol : | in vitro |
| Experimental Condition : | Control |
| Staining Method : | immunostaining |
| Slicing Direction : | coronal |
| Slice Thickness : | 40
μm |
| Tissue Shrinkage : |
Not reported
|
| Objective Type : | dry |
| Magnification : | 20x |
| Reconstruction Method : | NeuronJ |
| Date of Deposition : | 2019-03-26 |
| Date of Upload : | 2019-08-19 |
| Persistence Vector : | DEFiNE-Processed_J521_CA1.pvec |
| Note : | AAV cre injected and processed with Digital Enhancement of Fibers with Noise (DEFiNE) |
|
|
| Reference Article |
| Related Article Reference : | DEFiNE: A Method for Enhancement and Quantification of Fluorescently Labeled Axons. |
|
|
|
|
| Measurements |
| Soma Surface : |
N/A |
| Number of Stems : |
1 |
| Number of Bifurcations : |
86 |
| Number of Branches : |
173 |
| Overall Width : |
731.09 μm |
| Overall Height : |
696.96 μm |
| Overall Depth : |
0 μm |
| Average Diameter : |
1 μm |
| Total Length : |
9271.01 μm |
| Total Surface : |
29125.7 μm2 |
| Total Volume : |
7281.43 μm3 |
| Max Euclidean Distance : |
825.9 μm |
| Max Path Distance : |
2433.89 μm |
| Max Branch Order : |
36 |
| Average Contraction : |
0.94 |
| Total Fragmentation : |
1599 |
| Partition Asymmetry : |
0.68 |
| Average Rall's Ratio : |
2 |
| Average Bifurcation Angle Local : |
114.73° |
| Average Bifurcation Angle Remote : |
115.11° |
| Fractal Dimension : |
1.02 |
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0
