8.6.79 - Released: 2025-04-16 - Content: 273841 cells
Morphology File (Standardized)
Morphology File (Original)
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Log File (Original)



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NeuroMorpho.Org ID :  NMO_09575
Cell Name :  DAN-06-L
Archive Name :  Henny
Species Name :  rat
Strain :  Sprague-Dawley
Structural Domains :  Dendrites, Soma, Axon
Physical Integrity :  Dendrites Complete, Axon Incomplete
Morphological Attributes :  Diameter, 3D, Angles
Min Age :  Not reported
Max Age :  Not reported
Gender :  Male
Min Weight :  250 grams
Max Weight :  300 grams
Development :  adult
Primary Brain Region :  basal ganglia
Secondary Brain Region :  substantia nigra
Tertiary Brain Region :  pars compacta
Primary Cell Class :  principal cell
Secondary Cell Class :  dopaminergic
Tertiary Cell Class :  Not reported
Original Format :  Neurolucida.asc
Experiment Protocol :  in vivo
Experimental Condition :  Control
Staining Method :  Neurobiotin
Slicing Direction :  parasagittal
Slice Thickness :  50  μm
Tissue Shrinkage :  Reported (no values given)
Corrected 6% in xy, 8% in z
Objective Type :  oil
Magnification :  100x
Reconstruction Method :  Neurolucida
Date of Deposition :  2013-03-05
Date of Upload :  2013-05-06
Persistence Vector :  DAN-06-L.pvec
Note :  Neuron located on the left side of the brain. Registered and reconstructed by Matthew T C Brown.

Reference Article
Related Article Reference :  Structural correlates of heterogeneous in vivo activity of midbrain dopaminergic neurons.

Measurements
Soma Surface :  1239.45 μm2
Number of Stems :  7
Number of Bifurcations :  62
Number of Branches :  131
Overall Width :  390.13 μm
Overall Height :  990.94 μm
Overall Depth :  224.68 μm
Average Diameter :  0.67 μm
Total Length :  8281.32 μm
Total Surface :  17979.3 μm2
Total Volume :  3708.09 μm3
Max Euclidean Distance :  867.9 μm
Max Path Distance :  1058 μm
Max Branch Order :  19
Average Contraction :  0.91
Total Fragmentation :  4276
Partition Asymmetry :  0.7
Average Rall's Ratio :  1.41
Average Bifurcation Angle Local :  77.41°
Average Bifurcation Angle Remote :  75.44°
Fractal Dimension :  1.03

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