8.6.79 - Released: 2025-04-16 - Content: 273841 cells
Morphology File (Standardized)
Morphology File (Original)
Log File (Standardized)
Log File (Original)



3D Cell Viewer - Java, legacy
3D Cell Viewer - WebGL, novel
Animation
Similar Neurons
Details about selected cell
NeuroMorpho.Org ID :  NMO_09577
Cell Name :  DAN-04-R
Archive Name :  Henny
Species Name :  rat
Strain :  Sprague-Dawley
Structural Domains :  Dendrites, Soma, Axon
Physical Integrity :  Dendrites Complete, Axon Incomplete
Morphological Attributes :  Diameter, 3D, Angles
Min Age :  Not reported
Max Age :  Not reported
Gender :  Male
Min Weight :  250 grams
Max Weight :  300 grams
Development :  adult
Primary Brain Region :  basal ganglia
Secondary Brain Region :  substantia nigra
Tertiary Brain Region :  pars compacta
Primary Cell Class :  principal cell
Secondary Cell Class :  dopaminergic
Tertiary Cell Class :  Not reported
Original Format :  Neurolucida.asc
Experiment Protocol :  in vivo
Experimental Condition :  Control
Staining Method :  Neurobiotin
Slicing Direction :  parasagittal
Slice Thickness :  50  μm
Tissue Shrinkage :  Reported (no values given)
Corrected 6% in xy, 8% in z
Objective Type :  oil
Magnification :  100x
Reconstruction Method :  Neurolucida
Date of Deposition :  2013-03-05
Date of Upload :  2013-05-06
Persistence Vector :  DAN-04-R.pvec
Note :  Neuron located on the right side of the brain. Registered and reconstructed by Matthew T C Brown.

Reference Article
Related Article Reference :  Structural correlates of heterogeneous in vivo activity of midbrain dopaminergic neurons.

Measurements
Soma Surface :  572.46 μm2
Number of Stems :  4
Number of Bifurcations :  43
Number of Branches :  90
Overall Width :  528.7 μm
Overall Height :  964.64 μm
Overall Depth :  198.13 μm
Average Diameter :  0.62 μm
Total Length :  5728.81 μm
Total Surface :  12024.8 μm2
Total Volume :  2600.1 μm3
Max Euclidean Distance :  619.51 μm
Max Path Distance :  720.99 μm
Max Branch Order :  8
Average Contraction :  0.88
Total Fragmentation :  3098
Partition Asymmetry :  0.55
Average Rall's Ratio :  1.61
Average Bifurcation Angle Local :  78.36°
Average Bifurcation Angle Remote :  67.37°
Fractal Dimension :  1.04

© Copyright 2006-2025   George Mason University All Rights Reserved.   Link Graphic to NIF website