8.6.82 - Released: 2025-05-21 - Content: 275062 cells
Morphology File (Standardized)
Morphology File (Original)
Log File (Standardized)
Log File (Original)



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NeuroMorpho.Org ID :  NMO_158888
Cell Name :  CuRD5m40x-Iba1555BF12dg2J20H2O_d
Archive Name :  Lim_Kitazawa
Species Name :  mouse
Strain :  PDGF-hAPPSw,Ind J20
Structural Domains :  Processes, No Soma
Physical Integrity :  Processes Complete
Morphological Attributes :  No Diameter, 2D, Angles
Min Age :  6.0 months
Max Age :  6.0 months
Gender :  Female
Min Weight :  25 grams
Max Weight :  25 grams
Development :  adult
Primary Brain Region :  hippocampus
Secondary Brain Region :  dentate gyrus
Tertiary Brain Region :  Not reported
Primary Cell Class :  Glia
Secondary Cell Class :  microglia
Tertiary Cell Class :  Iba1-positive
Original Format :  Imaris.ims
Experiment Protocol :  in vitro
Experimental Condition :  Control
Staining Method :  immunostaining
Slicing Direction :  coronal
Slice Thickness :  40  μm
Tissue Shrinkage :  Not reported
Objective Type :  dry
Magnification :  40x
Reconstruction Method :  Imaris
Date of Deposition :  2021-05-20
Date of Upload :  2021-07-07
Persistence Vector :  CuRD5m40x-Iba1555BF12dg2J20H2O_d.pvec
Note :  Mice were exposed to Milli-Q water (H2O) for 5 months, starting at 1 month of age, and were analyzed at 6-month old. Reconstructions were obtained from a coronal section (Bregma: -2.54mm).

Reference Article
Related Article Reference :  Chronic copper exposure directs microglia towards degenerative expression signatures in wild-type and J20 mouse model of Alzheimer's disease.

Measurements
Soma Surface :  N/A
Number of Stems :  2
Number of Bifurcations :  4
Number of Branches :  10
Overall Width :  1.54 μm
Overall Height :  21.76 μm
Overall Depth :  7.12 μm
Average Diameter :  1.15 μm
Total Length :  59.05 μm
Total Surface :  208.59 μm2
Total Volume :  61.43 μm3
Max Euclidean Distance :  24.31 μm
Max Path Distance :  27.5 μm
Max Branch Order :  4
Average Contraction :  0.93
Total Fragmentation :  157
Partition Asymmetry :  0.4
Average Rall's Ratio :  2.05
Average Bifurcation Angle Local :  29.9°
Average Bifurcation Angle Remote :  30.94°
Fractal Dimension :  1.03

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