8.6.82 - Released: 2025-05-21 - Content: 275062 cells
Morphology File (Standardized)
Morphology File (Original)
Log File (Standardized)
Log File (Original)



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Details about selected cell
NeuroMorpho.Org ID :  NMO_255580
Cell Name :  Ctrl_Ts65Dn_5
Archive Name :  Dierssen
Species Name :  mouse
Strain :  C57/6Ei x C3H/HeSnJ (B6EiC3) F1
Structural Domains :  Dendrites, Soma, No Axon
Physical Integrity :  Dendrites Moderate
Morphological Attributes :  No Diameter, 2D, Angles
Min Age :  2.0 months
Max Age :  2.0 months
Gender :  Female
Min Weight :  Not reported
Max Weight :  Not reported
Development :  adult
Primary Brain Region :  neocortex
Secondary Brain Region :  frontal
Tertiary Brain Region :  secondary motor, layer 2-3
Primary Cell Class :  principal cell
Secondary Cell Class :  pyramidal
Tertiary Cell Class :  Not reported
Original Format :  Simple Neurite Tracer.swc
Experiment Protocol :  in vitro
Experimental Condition :  Control
Staining Method :  lucifer yellow
Slicing Direction :  parallel to the cortical surface
Slice Thickness :  150  μm
Tissue Shrinkage :  Not reported
Objective Type :  dry
Magnification :  40x
Reconstruction Method :  Simple Neurite Tracer
Date of Deposition :  2021-04-12
Date of Upload :  2023-03-23
Persistence Vector :  Ctrl_Ts65Dn_5.pvec
Note :  Dendrites were reconstructed completely within the slice, but only the basal trees were included

Reference Article
Related Article Reference :  Alterations of neocortical pyramidal cell phenotype in the Ts65Dn mouse model of Down syndrome: effects of environmental enrichment.

Measurements
Soma Surface :  2146.8 μm2
Number of Stems :  3
Number of Bifurcations :  42
Number of Branches :  87
Overall Width :  254.66 μm
Overall Height :  309.2 μm
Overall Depth :  1.62 μm
Average Diameter :  2.47 μm
Total Length :  4390.7 μm
Total Surface :  36403.2 μm2
Total Volume :  26834.8 μm3
Max Euclidean Distance :  206.67 μm
Max Path Distance :  217.82 μm
Max Branch Order :  8
Average Contraction :  0.95
Total Fragmentation :  1087
Partition Asymmetry :  0.45
Average Rall's Ratio :  1.69
Average Bifurcation Angle Local :  52.26°
Average Bifurcation Angle Remote :  52.2°
Fractal Dimension :  1.02

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