8.6.79 - Released: 2025-04-16 - Content: 273841 cells
Morphology File (Standardized)
Morphology File (Original)
Log File (Standardized)
Log File (Original)



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NeuroMorpho.Org ID :  NMO_255658
Cell Name :  Ctrl_Dyrk1A_het_4
Archive Name :  Dierssen
Species Name :  mouse
Strain :  C57Bl/6-129Ola
Structural Domains :  Dendrites, Soma, No Axon
Physical Integrity :  Dendrites Moderate
Morphological Attributes :  No Diameter, 2D, Angles
Min Age :  7.0 months
Max Age :  7.0 months
Gender :  Male
Min Weight :  Not reported
Max Weight :  Not reported
Development :  adult
Primary Brain Region :  neocortex
Secondary Brain Region :  frontal
Tertiary Brain Region :  secondary motor, layer 2-3
Primary Cell Class :  principal cell
Secondary Cell Class :  pyramidal
Tertiary Cell Class :  Not reported
Original Format :  Simple Neurite Tracer.swc
Experiment Protocol :  in vitro
Experimental Condition :  Control
Staining Method :  lucifer yellow
Slicing Direction :  parallel to the cortical surface
Slice Thickness :  150  μm
Tissue Shrinkage :  Not reported
Objective Type :  dry
Magnification :  40x
Reconstruction Method :  Simple Neurite Tracer
Date of Deposition :  2021-04-12
Date of Upload :  2023-03-23
Persistence Vector :  Ctrl_Dyrk1A_het_4.pvec
Note :  Dendrites were reconstructed completely within the slice, but only the basal trees were included

Reference Article
Related Article Reference :  Alterations in the phenotype of neocortical pyramidal cells in the Dyrk1A+/- mouse.

Measurements
Soma Surface :  357.39 μm2
Number of Stems :  4
Number of Bifurcations :  25
Number of Branches :  54
Overall Width :  243.84 μm
Overall Height :  282.33 μm
Overall Depth :  2.32 μm
Average Diameter :  0.25 μm
Total Length :  3384.54 μm
Total Surface :  2658.21 μm2
Total Volume :  166.14 μm3
Max Euclidean Distance :  211.67 μm
Max Path Distance :  232.57 μm
Max Branch Order :  5
Average Contraction :  0.92
Total Fragmentation :  6471
Partition Asymmetry :  0.5
Average Rall's Ratio :  2
Average Bifurcation Angle Local :  65.77°
Average Bifurcation Angle Remote :  50.55°
Fractal Dimension :  1.02

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