8.6.82 - Released: 2025-05-21 - Content: 275062 cells
Morphology File (Standardized)
Morphology File (Original)
Log File (Standardized)
Log File (Original)



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NeuroMorpho.Org ID :  NMO_159955
Cell Name :  Control42
Archive Name :  Zhan_Kipp
Species Name :  mouse
Strain :  C57BL/6J
Structural Domains :  Processes, Soma
Physical Integrity :  Processes Moderate
Morphological Attributes :  No Diameter, 3D, Angles
Min Age :  287.0 days
Max Age :  287.0 days
Gender :  Male
Min Weight :  Not reported
Max Weight :  Not reported
Development :  adult
Primary Brain Region :  neocortex
Secondary Brain Region :  anterior cingulate
Tertiary Brain Region :  layer 5
Primary Cell Class :  Glia
Secondary Cell Class :  microglia
Tertiary Cell Class :  Iba1-positive
Original Format :  Neurolucida.dat
Experiment Protocol :  in vitro
Experimental Condition :  Control
Staining Method :  immunostaining
Slicing Direction :  coronal
Slice Thickness :  5  μm
Tissue Shrinkage :  Not reported
Objective Type :  Not reported
Magnification :  Not reported
Reconstruction Method :  Neurolucida
Date of Deposition :  2021-07-02
Date of Upload :  2021-07-26
Persistence Vector :  Control42.pvec
Note :  Reconstructions were obtained from cortical layers 5-6 where microglial morphology should not be biased by the dense network of axonal bundles in the corpus callosum.

Reference Article
Related Article Reference :  Focal white matter lesions induce long-lasting axonal degeneration, neuroinflammation and behavioral deficits.

Measurements
Soma Surface :  97.2 μm2
Number of Stems :  4
Number of Bifurcations :  9
Number of Branches :  22
Overall Width :  8.93 μm
Overall Height :  49.43 μm
Overall Depth :  29.39 μm
Average Diameter :  0.52 μm
Total Length :  192.46 μm
Total Surface :  318.83 μm2
Total Volume :  45.4 μm3
Max Euclidean Distance :  34.2 μm
Max Path Distance :  48.38 μm
Max Branch Order :  3
Average Contraction :  0.84
Total Fragmentation :  205
Partition Asymmetry :  0.24
Average Rall's Ratio :  1.85
Average Bifurcation Angle Local :  85.26°
Average Bifurcation Angle Remote :  84.88°
Fractal Dimension :  1.08

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