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| Details about selected cell |
| NeuroMorpho.Org ID : | NMO_81056 |
| Cell Name : | Chen2pink |
| Archive Name : | Chen_Maniatis |
| Species Name : | mouse |
| Strain : | Pcdh-alpha-f/f;Slc6a4::Cre |
| Structural Domains : | No Dendrites, No Soma, Axon |
| Physical Integrity : | Axon Incomplete |
| Morphological Attributes : | Diameter, 3D, Angles |
| Min Age : | Not reported
|
| Max Age : | Not reported
|
| Gender : |
Not reported
|
| Min Weight : | Not reported
|
| Max Weight : | Not reported
|
| Development : | not reported |
| Primary Brain Region : | brainstem |
| Secondary Brain Region : | raphe nuclei |
| Tertiary Brain Region : | Not reported |
| Primary Cell Class : | principal cell |
| Secondary Cell Class : | serotonergic |
| Tertiary Cell Class : | hippocampus-projecting |
| Original Format : | Imaris.ims |
| Experiment Protocol : | in vitro |
| Experimental Condition : | Control |
| Staining Method : | immunostaining |
| Slicing Direction : | coronal |
| Slice Thickness : | 40
μm |
| Tissue Shrinkage : |
Not reported
|
| Objective Type : | Not reported |
| Magnification : | Not reported
|
| Reconstruction Method : | Imaris |
| Date of Deposition : | 2017-10-03 |
| Date of Upload : | 2018-04-16 |
| Persistence Vector : | Chen2pink.pvec |
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| Reference Article |
| Related Article Reference : | Pcdhalphac2 is required for axonal tiling and assembly of serotonergic circuitries in mice. |
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| Measurements |
| Soma Surface : |
N/A |
| Number of Stems : |
2 |
| Number of Bifurcations : |
13 |
| Number of Branches : |
28 |
| Overall Width : |
21.41 μm |
| Overall Height : |
39.38 μm |
| Overall Depth : |
10.98 μm |
| Average Diameter : |
0.91 μm |
| Total Length : |
192.67 μm |
| Total Surface : |
550.9 μm2 |
| Total Volume : |
151.73 μm3 |
| Max Euclidean Distance : |
37.66 μm |
| Max Path Distance : |
59.34 μm |
| Max Branch Order : |
10 |
| Average Contraction : |
0.85 |
| Total Fragmentation : |
677 |
| Partition Asymmetry : |
0.73 |
| Average Rall's Ratio : |
1.87 |
| Average Bifurcation Angle Local : |
111.7° |
| Average Bifurcation Angle Remote : |
123.82° |
| Fractal Dimension : |
1.06 |
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