8.6.92 - Released: 2025-10-03 - Content: 280015 cells
Morphology File (Standardized)
Morphology File (Original)
Log File (Standardized)
Log File (Original)



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NeuroMorpho.Org ID :  NMO_66478
Cell Name :  CS169s1c1-regular
Archive Name :  Moyer
Species Name :  rat
Strain :  Fischer 344
Structural Domains :  Dendrites, Soma, Axon
Physical Integrity :  Dendrites Moderate, Axon Incomplete
Morphological Attributes :  Diameter, 3D, Angles
Min Age :  5.0 months
Max Age :  5.0 months
Gender :  Male
Min Weight :  Not reported
Max Weight :  Not reported
Development :  adult
Primary Brain Region :  neocortex
Secondary Brain Region :  medial prefrontal
Tertiary Brain Region :  infralimbic, layer 5
Primary Cell Class :  principal cell
Secondary Cell Class :  pyramidal
Tertiary Cell Class :  Regular spiking
Original Format :  Neurolucida.dat
Experiment Protocol :  in vitro
Experimental Condition :  Control
Staining Method :  biocytin
Slicing Direction :  coronal
Slice Thickness :  Not reported
Tissue Shrinkage :  Not reported
Objective Type :  Not reported
Magnification :  Not reported
Reconstruction Method :  Neurolucida
Date of Deposition :  2015-01-30
Date of Upload :  2017-07-19
Persistence Vector :  CS169s1c1-regular.pvec
Note :  Soma located ~550 microns from pial surface

Reference Article
Related Article Reference :  Trace Fear Conditioning Differentially Modulates Intrinsic Excitability of Medial Prefrontal Cortex-Basolateral Complex of Amygdala Projection Neurons inInfralimbic and Prelimbic Cortices.

Measurements
Soma Surface :  1962.59 μm2
Number of Stems :  7
Number of Bifurcations :  52
Number of Branches :  111
Overall Width :  319.47 μm
Overall Height :  927.32 μm
Overall Depth :  80.5 μm
Average Diameter :  1.63 μm
Total Length :  7884.09 μm
Total Surface :  38527.3 μm2
Total Volume :  19793.4 μm3
Max Euclidean Distance :  640.22 μm
Max Path Distance :  763.49 μm
Max Branch Order :  14
Average Contraction :  0.87
Total Fragmentation :  2191
Partition Asymmetry :  0.48
Average Rall's Ratio :  7.63
Average Bifurcation Angle Local :  71.65°
Average Bifurcation Angle Remote :  61.56°
Fractal Dimension :  1.03

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