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| Details about selected cell |
| NeuroMorpho.Org ID : | NMO_250018 |
| Cell Name : | BR5-1_IBA1_Exp_S2_2 |
| Archive Name : | Garcia-Hernandez_DeSantis |
| Species Name : | rat |
| Strain : | Wistar |
| Structural Domains : | Processes, Soma |
| Physical Integrity : | Processes Moderate |
| Morphological Attributes : | No Diameter, 3D, Angles |
| Min Age : | 2.0 months
|
| Max Age : | 3.0 months
|
| Gender : |
Male
|
| Min Weight : | 300 grams
|
| Max Weight : | 400 grams
|
| Development : | adult |
| Primary Brain Region : | hippocampus |
| Secondary Brain Region : | dentate gyrus |
| Tertiary Brain Region : | granule layer |
| Primary Cell Class : | Glia |
| Secondary Cell Class : | microglia |
| Tertiary Cell Class : | Iba1-positive |
| Original Format : | Neurolucida.dat |
| Experiment Protocol : | in vivo |
| Experimental Condition : | ibotenic acid injection |
| Staining Method : | immunostaining |
| Slicing Direction : | coronal |
| Slice Thickness : | 50
μm |
| Tissue Shrinkage : |
Not reported
|
| Objective Type : | dry |
| Magnification : | 20x , 40x |
| Reconstruction Method : | Neurolucida |
| Date of Deposition : | 2022-11-02 |
| Date of Upload : | 2022-12-07 |
| Persistence Vector : | BR5-1_IBA1_Exp_S2_2.pvec |
| Note : | Neuronal death was achieved by injecting 1 microliter of saline and ibotenic acid at a concentration of 2.5 microgram/microliter in the dorsal hippocampus. |
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| Reference Article |
| Related Article Reference : | Mapping microglia and astrocyte activation in vivo using diffusion MRI. |
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| Measurements |
| Soma Surface : |
337.22 μm2 |
| Number of Stems : |
8 |
| Number of Bifurcations : |
3 |
| Number of Branches : |
14 |
| Overall Width : |
25.76 μm |
| Overall Height : |
16.48 μm |
| Overall Depth : |
8.07 μm |
| Average Diameter : |
0.25 μm |
| Total Length : |
122.53 μm |
| Total Surface : |
96.23 μm2 |
| Total Volume : |
6.01 μm3 |
| Max Euclidean Distance : |
17.91 μm |
| Max Path Distance : |
26 μm |
| Max Branch Order : |
1 |
| Average Contraction : |
0.89 |
| Total Fragmentation : |
86 |
| Partition Asymmetry : |
0 |
| Average Rall's Ratio : |
2 |
| Average Bifurcation Angle Local : |
93.32° |
| Average Bifurcation Angle Remote : |
109.03° |
| Fractal Dimension : |
1.05 |
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