8.6.79 - Released: 2025-04-16 - Content: 273841 cells
Morphology File (Standardized)
Morphology File (Original)
Log File (Standardized)
Log File (Original)



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NeuroMorpho.Org ID :  NMO_121244
Cell Name :  BCCP89-GFAP_80um_Z-fixed_sec6-cel1-p-b89
Archive Name :  Diniz
Species Name :  Semipalmated sandpiper
Strain :  Not reported
Structural Domains :  Processes, Soma
Physical Integrity :  Processes Moderate
Morphological Attributes :  Diameter, 3D, Angles
Min Age :  Not reported
Max Age :  Not reported
Gender :  Not reported
Min Weight :  Not reported
Max Weight :  Not reported
Development :  adult
Primary Brain Region :  hippocampus
Secondary Brain Region :  Not reported
Tertiary Brain Region :  Not reported
Primary Cell Class :  Glia
Secondary Cell Class :  astrocyte
Tertiary Cell Class :  GFAP-positive
Original Format :  Neurolucida.asc
Experiment Protocol :  in vitro
Experimental Condition :  Wintering
Staining Method :  immunostaining
Slicing Direction :  coronal
Slice Thickness :  80  μm
Tissue Shrinkage :  Reported 75% in z
Corrected 75% in z
Objective Type :  oil
Magnification :  100x
Reconstruction Method :  Neurolucida
Date of Deposition :  2019-08-19
Date of Upload :  2019-12-13
Persistence Vector :  BCCP89-GFAP_80um_Z-fixed_sec6-cel1-p-b89.pvec
Note :  The anatomical region encompasses the whole hippocampal formation, including parahippocampal area

Reference Article
Related Article Reference :  Hippocampal Astrocytes in Migrating and Wintering Semipalmated Sandpiper Calidris pusilla.

Measurements
Soma Surface :  44.5 μm2
Number of Stems :  6
Number of Bifurcations :  15
Number of Branches :  36
Overall Width :  5.03 μm
Overall Height :  24.38 μm
Overall Depth :  21.6 μm
Average Diameter :  0.41 μm
Total Length :  304.05 μm
Total Surface :  394.77 μm2
Total Volume :  49.68 μm3
Max Euclidean Distance :  23.91 μm
Max Path Distance :  39.05 μm
Max Branch Order :  4
Average Contraction :  0.74
Total Fragmentation :  568
Partition Asymmetry :  0.49
Average Rall's Ratio :  1.47
Average Bifurcation Angle Local :  79.84°
Average Bifurcation Angle Remote :  65.8°
Fractal Dimension :  1.17

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