8.6.79 - Released: 2025-04-16 - Content: 273841 cells
Morphology File (Standardized)
Morphology File (Original)
Log File (Standardized)
Log File (Original)



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NeuroMorpho.Org ID :  NMO_121112
Cell Name :  BCCP89-GFAP_80um_Z-fixed_sec3-cel3-p-b89
Archive Name :  Diniz
Species Name :  Semipalmated sandpiper
Strain :  Not reported
Structural Domains :  Processes, Soma
Physical Integrity :  Processes Moderate
Morphological Attributes :  Diameter, 3D, Angles
Min Age :  Not reported
Max Age :  Not reported
Gender :  Not reported
Min Weight :  Not reported
Max Weight :  Not reported
Development :  adult
Primary Brain Region :  hippocampus
Secondary Brain Region :  Not reported
Tertiary Brain Region :  Not reported
Primary Cell Class :  Glia
Secondary Cell Class :  astrocyte
Tertiary Cell Class :  GFAP-positive
Original Format :  Neurolucida.asc
Experiment Protocol :  in vitro
Experimental Condition :  Wintering
Staining Method :  immunostaining
Slicing Direction :  coronal
Slice Thickness :  80  μm
Tissue Shrinkage :  Reported 75% in z
Corrected 75% in z
Objective Type :  oil
Magnification :  100x
Reconstruction Method :  Neurolucida
Date of Deposition :  2019-08-19
Date of Upload :  2019-12-13
Persistence Vector :  BCCP89-GFAP_80um_Z-fixed_sec3-cel3-p-b89.pvec
Note :  The anatomical region encompasses the whole hippocampal formation, including parahippocampal area

Reference Article
Related Article Reference :  Hippocampal Astrocytes in Migrating and Wintering Semipalmated Sandpiper Calidris pusilla.

Measurements
Soma Surface :  80.1 μm2
Number of Stems :  7
Number of Bifurcations :  25
Number of Branches :  57
Overall Width :  6.8 μm
Overall Height :  26.44 μm
Overall Depth :  17.66 μm
Average Diameter :  0.33 μm
Total Length :  277.32 μm
Total Surface :  312.04 μm2
Total Volume :  38.32 μm3
Max Euclidean Distance :  15.17 μm
Max Path Distance :  27.65 μm
Max Branch Order :  4
Average Contraction :  0.79
Total Fragmentation :  590
Partition Asymmetry :  0.38
Average Rall's Ratio :  1.39
Average Bifurcation Angle Local :  95.73°
Average Bifurcation Angle Remote :  76.78°
Fractal Dimension :  1.14

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