8.6.79 - Released: 2025-04-16 - Content: 273841 cells
Morphology File (Standardized)
Morphology File (Original)
Log File (Standardized)
Log File (Original)



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NeuroMorpho.Org ID :  NMO_121139
Cell Name :  BCCP88-GFAP_80um_Z-fixed_sec2-cel5-p-b88
Archive Name :  Diniz
Species Name :  Semipalmated sandpiper
Strain :  Not reported
Structural Domains :  Processes, Soma
Physical Integrity :  Processes Moderate
Morphological Attributes :  Diameter, 3D, Angles
Min Age :  Not reported
Max Age :  Not reported
Gender :  Not reported
Min Weight :  Not reported
Max Weight :  Not reported
Development :  adult
Primary Brain Region :  hippocampus
Secondary Brain Region :  Not reported
Tertiary Brain Region :  Not reported
Primary Cell Class :  Glia
Secondary Cell Class :  astrocyte
Tertiary Cell Class :  GFAP-positive
Original Format :  Neurolucida.asc
Experiment Protocol :  in vitro
Experimental Condition :  Wintering
Staining Method :  immunostaining
Slicing Direction :  coronal
Slice Thickness :  80  μm
Tissue Shrinkage :  Reported 75% in z
Corrected 75% in z
Objective Type :  oil
Magnification :  100x
Reconstruction Method :  Neurolucida
Date of Deposition :  2019-08-19
Date of Upload :  2019-12-13
Persistence Vector :  BCCP88-GFAP_80um_Z-fixed_sec2-cel5-p-b88.pvec
Note :  The anatomical region encompasses the whole hippocampal formation, including parahippocampal area

Reference Article
Related Article Reference :  Hippocampal Astrocytes in Migrating and Wintering Semipalmated Sandpiper Calidris pusilla.

Measurements
Soma Surface :  77.11 μm2
Number of Stems :  5
Number of Bifurcations :  15
Number of Branches :  35
Overall Width :  10.75 μm
Overall Height :  35.52 μm
Overall Depth :  21.35 μm
Average Diameter :  0.38 μm
Total Length :  313.14 μm
Total Surface :  400.52 μm2
Total Volume :  48.76 μm3
Max Euclidean Distance :  23.57 μm
Max Path Distance :  43.55 μm
Max Branch Order :  4
Average Contraction :  0.67
Total Fragmentation :  348
Partition Asymmetry :  0.37
Average Rall's Ratio :  1.26
Average Bifurcation Angle Local :  97.02°
Average Bifurcation Angle Remote :  71.09°
Fractal Dimension :  1.2

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