8.6.79 - Released: 2025-04-16 - Content: 273841 cells
Morphology File (Standardized)
Morphology File (Original)
Log File (Standardized)
Log File (Original)



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NeuroMorpho.Org ID :  NMO_121382
Cell Name :  BCCP21-GFAP_60um_Z-fixed_sec9-cel9-p-c21
Archive Name :  Diniz
Species Name :  Semipalmated sandpiper
Strain :  Not reported
Structural Domains :  Processes, Soma
Physical Integrity :  Processes Moderate
Morphological Attributes :  Diameter, 3D, Angles
Min Age :  Not reported
Max Age :  Not reported
Gender :  Not reported
Min Weight :  Not reported
Max Weight :  Not reported
Development :  adult
Primary Brain Region :  hippocampus
Secondary Brain Region :  Not reported
Tertiary Brain Region :  Not reported
Primary Cell Class :  Glia
Secondary Cell Class :  astrocyte
Tertiary Cell Class :  GFAP-positive
Original Format :  Neurolucida.asc
Experiment Protocol :  in vitro
Experimental Condition :  Migrating
Staining Method :  immunostaining
Slicing Direction :  coronal
Slice Thickness :  60  μm
Tissue Shrinkage :  Reported 75% in z
Corrected 75% in z
Objective Type :  oil
Magnification :  100x
Reconstruction Method :  Neurolucida
Date of Deposition :  2019-08-19
Date of Upload :  2019-12-13
Persistence Vector :  BCCP21-GFAP_60um_Z-fixed_sec9-cel9-p-c21.pvec
Note :  The anatomical region encompasses the whole hippocampal formation, including parahippocampal area

Reference Article
Related Article Reference :  Hippocampal Astrocytes in Migrating and Wintering Semipalmated Sandpiper Calidris pusilla.

Measurements
Soma Surface :  107.18 μm2
Number of Stems :  7
Number of Bifurcations :  36
Number of Branches :  79
Overall Width :  37.88 μm
Overall Height :  28.55 μm
Overall Depth :  13.79 μm
Average Diameter :  0.38 μm
Total Length :  676.03 μm
Total Surface :  835.86 μm2
Total Volume :  105.21 μm3
Max Euclidean Distance :  27.9 μm
Max Path Distance :  48.88 μm
Max Branch Order :  6
Average Contraction :  0.69
Total Fragmentation :  1140
Partition Asymmetry :  0.42
Average Rall's Ratio :  1.54
Average Bifurcation Angle Local :  89.42°
Average Bifurcation Angle Remote :  68.05°
Fractal Dimension :  1.19

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