8.6.79 - Released: 2025-04-16 - Content: 273841 cells
Morphology File (Standardized)
Morphology File (Original)
Log File (Standardized)
Log File (Original)



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NeuroMorpho.Org ID :  NMO_121399
Cell Name :  BCCP21-GFAP_60um_Z-fixed_sec1-cel1-p-c21
Archive Name :  Diniz
Species Name :  Semipalmated sandpiper
Strain :  Not reported
Structural Domains :  Processes, Soma
Physical Integrity :  Processes Moderate
Morphological Attributes :  Diameter, 3D, Angles
Min Age :  Not reported
Max Age :  Not reported
Gender :  Not reported
Min Weight :  Not reported
Max Weight :  Not reported
Development :  adult
Primary Brain Region :  hippocampus
Secondary Brain Region :  Not reported
Tertiary Brain Region :  Not reported
Primary Cell Class :  Glia
Secondary Cell Class :  astrocyte
Tertiary Cell Class :  GFAP-positive
Original Format :  Neurolucida.asc
Experiment Protocol :  in vitro
Experimental Condition :  Migrating
Staining Method :  immunostaining
Slicing Direction :  coronal
Slice Thickness :  60  μm
Tissue Shrinkage :  Reported 75% in z
Corrected 75% in z
Objective Type :  oil
Magnification :  100x
Reconstruction Method :  Neurolucida
Date of Deposition :  2019-08-19
Date of Upload :  2019-12-13
Persistence Vector :  BCCP21-GFAP_60um_Z-fixed_sec1-cel1-p-c21.pvec
Note :  The anatomical region encompasses the whole hippocampal formation, including parahippocampal area

Reference Article
Related Article Reference :  Hippocampal Astrocytes in Migrating and Wintering Semipalmated Sandpiper Calidris pusilla.

Measurements
Soma Surface :  146.57 μm2
Number of Stems :  8
Number of Bifurcations :  38
Number of Branches :  84
Overall Width :  6.94 μm
Overall Height :  29.02 μm
Overall Depth :  23.45 μm
Average Diameter :  0.3 μm
Total Length :  456.55 μm
Total Surface :  474.27 μm2
Total Volume :  50.6 μm3
Max Euclidean Distance :  21.61 μm
Max Path Distance :  35.23 μm
Max Branch Order :  6
Average Contraction :  0.76
Total Fragmentation :  885
Partition Asymmetry :  0.44
Average Rall's Ratio :  1.78
Average Bifurcation Angle Local :  86.98°
Average Bifurcation Angle Remote :  78.57°
Fractal Dimension :  1.16

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