8.6.79 - Released: 2025-04-16 - Content: 273841 cells
Morphology File (Standardized)
Morphology File (Original)
Log File (Standardized)
Log File (Original)



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NeuroMorpho.Org ID :  NMO_121437
Cell Name :  BCCP16-GFAP_60um_Z-fixed_cel4-sec12-p16
Archive Name :  Diniz
Species Name :  Semipalmated sandpiper
Strain :  Not reported
Structural Domains :  Processes, Soma
Physical Integrity :  Processes Moderate
Morphological Attributes :  Diameter, 3D, Angles
Min Age :  Not reported
Max Age :  Not reported
Gender :  Not reported
Min Weight :  Not reported
Max Weight :  Not reported
Development :  adult
Primary Brain Region :  hippocampus
Secondary Brain Region :  Not reported
Tertiary Brain Region :  Not reported
Primary Cell Class :  Glia
Secondary Cell Class :  astrocyte
Tertiary Cell Class :  GFAP-positive
Original Format :  Neurolucida.asc
Experiment Protocol :  in vitro
Experimental Condition :  Migrating
Staining Method :  immunostaining
Slicing Direction :  coronal
Slice Thickness :  60  μm
Tissue Shrinkage :  Reported 75% in z
Corrected 75% in z
Objective Type :  oil
Magnification :  100x
Reconstruction Method :  Neurolucida
Date of Deposition :  2019-08-19
Date of Upload :  2019-12-13
Persistence Vector :  BCCP16-GFAP_60um_Z-fixed_cel4-sec12-p16.pvec
Note :  The anatomical region encompasses the whole hippocampal formation, including parahippocampal area

Reference Article
Related Article Reference :  Hippocampal Astrocytes in Migrating and Wintering Semipalmated Sandpiper Calidris pusilla.

Measurements
Soma Surface :  144.68 μm2
Number of Stems :  7
Number of Bifurcations :  17
Number of Branches :  41
Overall Width :  46.46 μm
Overall Height :  18.41 μm
Overall Depth :  15.73 μm
Average Diameter :  0.33 μm
Total Length :  427.74 μm
Total Surface :  484.75 μm2
Total Volume :  50.56 μm3
Max Euclidean Distance :  33.85 μm
Max Path Distance :  54.21 μm
Max Branch Order :  6
Average Contraction :  0.68
Total Fragmentation :  1065
Partition Asymmetry :  0.4
Average Rall's Ratio :  1.59
Average Bifurcation Angle Local :  93.16°
Average Bifurcation Angle Remote :  65.47°
Fractal Dimension :  1.19

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