8.6.96 - Released: 2025-11-05 - Content: 284158 cells
Morphology File (Standardized)
Morphology File (Original)
Log File (Standardized)
Log File (Original)



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NeuroMorpho.Org ID :  NMO_121169
Cell Name :  BCCP105-GFAP_80um_Z-fixed_sec4-cel2-p-b105
Archive Name :  Diniz
Species Name :  Semipalmated sandpiper
Strain :  Not reported
Structural Domains :  Processes, Soma
Physical Integrity :  Processes Moderate
Morphological Attributes :  Diameter, 3D, Angles
Min Age :  Not reported
Max Age :  Not reported
Gender :  Not reported
Min Weight :  Not reported
Max Weight :  Not reported
Development :  adult
Primary Brain Region :  hippocampus
Secondary Brain Region :  Not reported
Tertiary Brain Region :  Not reported
Primary Cell Class :  Glia
Secondary Cell Class :  astrocyte
Tertiary Cell Class :  GFAP-positive
Original Format :  Neurolucida.asc
Experiment Protocol :  in vitro
Experimental Condition :  Wintering
Staining Method :  immunostaining
Slicing Direction :  coronal
Slice Thickness :  80  μm
Tissue Shrinkage :  Reported 75% in z
Corrected 75% in z
Objective Type :  oil
Magnification :  100x
Reconstruction Method :  Neurolucida
Date of Deposition :  2019-08-19
Date of Upload :  2019-12-13
Persistence Vector :  BCCP105-GFAP_80um_Z-fixed_sec4-cel2-p-b105.pvec
Note :  The anatomical region encompasses the whole hippocampal formation, including parahippocampal area

Reference Article
Related Article Reference :  Hippocampal Astrocytes in Migrating and Wintering Semipalmated Sandpiper Calidris pusilla.

Measurements
Soma Surface :  115.91 μm2
Number of Stems :  4
Number of Bifurcations :  18
Number of Branches :  40
Overall Width :  10.38 μm
Overall Height :  33.83 μm
Overall Depth :  24.01 μm
Average Diameter :  0.33 μm
Total Length :  465.69 μm
Total Surface :  539.21 μm2
Total Volume :  65.36 μm3
Max Euclidean Distance :  25.18 μm
Max Path Distance :  50.65 μm
Max Branch Order :  5
Average Contraction :  0.59
Total Fragmentation :  871
Partition Asymmetry :  0.27
Average Rall's Ratio :  1.25
Average Bifurcation Angle Local :  89.77°
Average Bifurcation Angle Remote :  78.49°
Fractal Dimension :  1.27

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