8.6.79 - Released: 2025-04-16 - Content: 273841 cells
Morphology File (Standardized)
Morphology File (Original)
Log File (Standardized)
Log File (Original)



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NeuroMorpho.Org ID :  NMO_121066
Cell Name :  BCCP105-GFAP_80um_Z-fixed_sec4-cel1-p-b105
Archive Name :  Diniz
Species Name :  Semipalmated sandpiper
Strain :  Not reported
Structural Domains :  Processes, Soma
Physical Integrity :  Processes Moderate
Morphological Attributes :  Diameter, 3D, Angles
Min Age :  Not reported
Max Age :  Not reported
Gender :  Not reported
Min Weight :  Not reported
Max Weight :  Not reported
Development :  adult
Primary Brain Region :  hippocampus
Secondary Brain Region :  Not reported
Tertiary Brain Region :  Not reported
Primary Cell Class :  Glia
Secondary Cell Class :  astrocyte
Tertiary Cell Class :  GFAP-positive
Original Format :  Neurolucida.asc
Experiment Protocol :  in vitro
Experimental Condition :  Wintering
Staining Method :  immunostaining
Slicing Direction :  coronal
Slice Thickness :  80  μm
Tissue Shrinkage :  Reported 75% in z
Corrected 75% in z
Objective Type :  oil
Magnification :  100x
Reconstruction Method :  Neurolucida
Date of Deposition :  2019-08-19
Date of Upload :  2019-12-13
Persistence Vector :  BCCP105-GFAP_80um_Z-fixed_sec4-cel1-p-b105.pvec
Note :  The anatomical region encompasses the whole hippocampal formation, including parahippocampal area

Reference Article
Related Article Reference :  Hippocampal Astrocytes in Migrating and Wintering Semipalmated Sandpiper Calidris pusilla.

Measurements
Soma Surface :  157.42 μm2
Number of Stems :  8
Number of Bifurcations :  17
Number of Branches :  42
Overall Width :  6.02 μm
Overall Height :  28.4 μm
Overall Depth :  16.45 μm
Average Diameter :  0.38 μm
Total Length :  310.83 μm
Total Surface :  400.24 μm2
Total Volume :  56.39 μm3
Max Euclidean Distance :  18.75 μm
Max Path Distance :  37.53 μm
Max Branch Order :  3
Average Contraction :  0.64
Total Fragmentation :  582
Partition Asymmetry :  0.41
Average Rall's Ratio :  1.31
Average Bifurcation Angle Local :  71.34°
Average Bifurcation Angle Remote :  63.48°
Fractal Dimension :  1.21

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