8.6.96 - Released: 2025-11-05 - Content: 284158 cells
Morphology File (Standardized)
Morphology File (Original)
Log File (Standardized)
Log File (Original)



3D Cell Viewer - Java, legacy
3D Cell Viewer - WebGL, novel
Animation
Similar Neurons
Details about selected cell
NeuroMorpho.Org ID :  NMO_121118
Cell Name :  BCCP100-GFAP_80um_Z-fixed_sec5-cel1-p-b100
Archive Name :  Diniz
Species Name :  Semipalmated sandpiper
Strain :  Not reported
Structural Domains :  Processes, Soma
Physical Integrity :  Processes Moderate
Morphological Attributes :  Diameter, 3D, Angles
Min Age :  Not reported
Max Age :  Not reported
Gender :  Not reported
Min Weight :  Not reported
Max Weight :  Not reported
Development :  adult
Primary Brain Region :  hippocampus
Secondary Brain Region :  Not reported
Tertiary Brain Region :  Not reported
Primary Cell Class :  Glia
Secondary Cell Class :  astrocyte
Tertiary Cell Class :  GFAP-positive
Original Format :  Neurolucida.asc
Experiment Protocol :  in vitro
Experimental Condition :  Wintering
Staining Method :  immunostaining
Slicing Direction :  coronal
Slice Thickness :  80  μm
Tissue Shrinkage :  Reported 75% in z
Corrected 75% in z
Objective Type :  oil
Magnification :  100x
Reconstruction Method :  Neurolucida
Date of Deposition :  2019-08-19
Date of Upload :  2019-12-13
Persistence Vector :  BCCP100-GFAP_80um_Z-fixed_sec5-cel1-p-b100.pvec
Note :  The anatomical region encompasses the whole hippocampal formation, including parahippocampal area

Reference Article
Related Article Reference :  Hippocampal Astrocytes in Migrating and Wintering Semipalmated Sandpiper Calidris pusilla.

Measurements
Soma Surface :  162.15 μm2
Number of Stems :  3
Number of Bifurcations :  35
Number of Branches :  73
Overall Width :  7.78 μm
Overall Height :  45.23 μm
Overall Depth :  28.94 μm
Average Diameter :  0.27 μm
Total Length :  455.57 μm
Total Surface :  424.23 μm2
Total Volume :  52.08 μm3
Max Euclidean Distance :  43.73 μm
Max Path Distance :  70.54 μm
Max Branch Order :  12
Average Contraction :  0.71
Total Fragmentation :  672
Partition Asymmetry :  0.58
Average Rall's Ratio :  1.48
Average Bifurcation Angle Local :  82.86°
Average Bifurcation Angle Remote :  82.8°
Fractal Dimension :  1.19

© Copyright 2006-2025   George Mason University All Rights Reserved.   Link Graphic to NIF website