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| Details about selected cell |
| NeuroMorpho.Org ID : | NMO_10716 |
| Cell Name : | B13a |
| Archive Name : | Somogyi |
| Species Name : | rat |
| Strain : | Sprague-Dawley |
| Structural Domains : | Dendrites, Soma, Axon |
| Physical Integrity : | Dendrites Complete, Axon Moderate |
| Morphological Attributes : | Diameter, 3D, Angles |
| Min Age : | Not reported
|
| Max Age : | Not reported
|
| Gender : |
Male
|
| Min Weight : | 250 grams
|
| Max Weight : | 350 grams
|
| Development : | not reported |
| Primary Brain Region : | hippocampus |
| Secondary Brain Region : | CA3 |
| Tertiary Brain Region : | pyramidal layer |
| Primary Cell Class : | interneuron |
| Secondary Cell Class : | basket |
| Tertiary Cell Class : | Parvalbumin (PV)-positive |
| Original Format : | Neurolucida.dat |
| Experiment Protocol : | in vivo |
| Experimental Condition : | Control |
| Staining Method : | Neurobiotin |
| Slicing Direction : | coronal |
| Slice Thickness : | 70
μm |
| Tissue Shrinkage : |
Reported (no values given)
Corrected (no values given)
|
| Objective Type : | oil |
| Magnification : | 100x |
| Reconstruction Method : | Neurolucida |
| Date of Deposition : | 2013-08-05 |
| Date of Upload : | 2014-05-30 |
| Persistence Vector : | B13a.pvec |
| Note : |
Additional reconstruction files of this cell available
here, including one with just the dendritic arbor (for consistency with the rest of the dataset). |
| Note : | The authors' shrinkage corrections varied by processing method and were based on detailed measurements in the X/Y and separately in the Z directions. The data in the Reference Article show the corrected tissue shrinkage values. Morphometric measurements posted here are only approximate. The exact values are reported in the Reference Article. |
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| Reference Article |
| Related Article Reference : | Distinct dendritic arborization and in vivo firing patterns of parvalbumin-expressing basket cells in the hippocampal area CA3. |
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| Measurements |
| Soma Surface : |
1893.76 μm2 |
| Number of Stems : |
7 |
| Number of Bifurcations : |
544 |
| Number of Branches : |
1095 |
| Overall Width : |
742 μm |
| Overall Height : |
526.83 μm |
| Overall Depth : |
785.28 μm |
| Average Diameter : |
0.45 μm |
| Total Length : |
36450.1 μm |
| Total Surface : |
53926 μm2 |
| Total Volume : |
10194 μm3 |
| Max Euclidean Distance : |
675.76 μm |
| Max Path Distance : |
1352.89 μm |
| Max Branch Order : |
40 |
| Average Contraction : |
0.81 |
| Total Fragmentation : |
23692 |
| Partition Asymmetry : |
0.6 |
| Average Rall's Ratio : |
2.04 |
| Average Bifurcation Angle Local : |
90.18° |
| Average Bifurcation Angle Remote : |
77.05° |
| Fractal Dimension : |
1.04 |
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