8.6.79 - Released: 2025-04-16 - Content: 273841 cells
Morphology File (Standardized)
Morphology File (Original)
Log File (Standardized)
Log File (Original)



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NeuroMorpho.Org ID :  NMO_110130
Cell Name :  Axon-070516-DSCAM-T4-day-2-scaled-smooth
Archive Name :  Cohen-Cory
Species Name :  Xenopus laevis
Strain :  Wildtype
Structural Domains :  No Dendrites, No Soma, Axon
Physical Integrity :  Axon Moderate
Morphological Attributes :  Diameter, 3D, Angles
Min Age :  7.0 days
Max Age :  7.0 days
Gender :  Not reported
Min Weight :  Not reported
Max Weight :  Not reported
Development :  tadpole
Primary Brain Region :  retina
Secondary Brain Region :  Not reported
Tertiary Brain Region :  Not reported
Primary Cell Class :  principal cell
Secondary Cell Class :  ganglion
Tertiary Cell Class :  Not reported
Original Format :  Neuromantic.swc
Experiment Protocol :  in vivo
Experimental Condition :  DSCAM downregulation
Staining Method :  Alexa Fluor 488 - Dextran
Slicing Direction :  horizontal
Slice Thickness :  1  μm
Tissue Shrinkage :  Not reported
Objective Type :  water
Magnification :  63x
Reconstruction Method :  Neuromantic
Date of Deposition :  2019-04-11
Date of Upload :  2019-08-19
Persistence Vector :  Axon-070516-DSCAM-T4-day-2-scaled-smooth.pvec
Note :  Embryonic stage 45. Imaging started 5 days post fertilization. Co-labeled by single-cell electroporation with Lissamine-tagged morpholino

Reference Article
Related Article Reference :  DSCAM differentially modulates pre- and postsynaptic structural and functional central connectivity during visual system wiring.

Measurements
Soma Surface :  N/A
Number of Stems :  1
Number of Bifurcations :  6
Number of Branches :  13
Overall Width :  39.92 μm
Overall Height :  149.8 μm
Overall Depth :  24.4 μm
Average Diameter :  0.59 μm
Total Length :  390.41 μm
Total Surface :  722.97 μm2
Total Volume :  122.34 μm3
Max Euclidean Distance :  160.41 μm
Max Path Distance :  210.68 μm
Max Branch Order :  5
Average Contraction :  0.92
Total Fragmentation :  150
Partition Asymmetry :  0.58
Average Rall's Ratio :  2.21
Average Bifurcation Angle Local :  85.26°
Average Bifurcation Angle Remote :  65.87°
Fractal Dimension :  1.02

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