8.6.82 - Released: 2025-05-21 - Content: 275062 cells
Morphology File (Standardized)
Morphology File (Original)
Log File (Standardized)
Log File (Original)



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NeuroMorpho.Org ID :  NMO_110119
Cell Name :  Axon-062116-SCE-DSCAM-T2-day-2-scaled-smooth
Archive Name :  Cohen-Cory
Species Name :  Xenopus laevis
Strain :  Wildtype
Structural Domains :  No Dendrites, No Soma, Axon
Physical Integrity :  Axon Moderate
Morphological Attributes :  Diameter, 3D, Angles
Min Age :  7.0 days
Max Age :  7.0 days
Gender :  Not reported
Min Weight :  Not reported
Max Weight :  Not reported
Development :  tadpole
Primary Brain Region :  retina
Secondary Brain Region :  Not reported
Tertiary Brain Region :  Not reported
Primary Cell Class :  principal cell
Secondary Cell Class :  ganglion
Tertiary Cell Class :  Not reported
Original Format :  Neuromantic.swc
Experiment Protocol :  in vivo
Experimental Condition :  DSCAM downregulation
Staining Method :  Alexa Fluor 488 - Dextran
Slicing Direction :  horizontal
Slice Thickness :  1  μm
Tissue Shrinkage :  Not reported
Objective Type :  water
Magnification :  63x
Reconstruction Method :  Neuromantic
Date of Deposition :  2019-04-11
Date of Upload :  2019-08-19
Persistence Vector :  Axon-062116-SCE-DSCAM-T2-day-2-scaled-smooth.pvec
Note :  Embryonic stage 45. Imaging started 5 days post fertilization. Co-labeled by single-cell electroporation with Lissamine-tagged morpholino

Reference Article
Related Article Reference :  DSCAM differentially modulates pre- and postsynaptic structural and functional central connectivity during visual system wiring.

Measurements
Soma Surface :  N/A
Number of Stems :  1
Number of Bifurcations :  3
Number of Branches :  7
Overall Width :  4.9 μm
Overall Height :  76.68 μm
Overall Depth :  7.69 μm
Average Diameter :  2.75 μm
Total Length :  106.53 μm
Total Surface :  1476.01 μm2
Total Volume :  3025.21 μm3
Max Euclidean Distance :  83.67 μm
Max Path Distance :  86.84 μm
Max Branch Order :  3
Average Contraction :  0.99
Total Fragmentation :  28
Partition Asymmetry :  0.67
Average Rall's Ratio :  7.29
Average Bifurcation Angle Local :  94.01°
Average Bifurcation Angle Remote :  95.7°
Fractal Dimension :  1

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