8.6.82 - Released: 2025-05-21 - Content: 275062 cells
Morphology File (Standardized)
Morphology File (Original)
Log File (Standardized)
Log File (Original)



3D Cell Viewer - Java, legacy
3D Cell Viewer - WebGL, novel
Animation
Similar Neurons
Details about selected cell
NeuroMorpho.Org ID :  NMO_110116
Cell Name :  Axon-031116-DSCAM-T2A-Day-2-scaled-smooth
Archive Name :  Cohen-Cory
Species Name :  Xenopus laevis
Strain :  Wildtype
Structural Domains :  No Dendrites, Soma, Axon
Physical Integrity :  Axon Moderate
Morphological Attributes :  Diameter, 3D, Angles
Min Age :  7.0 days
Max Age :  7.0 days
Gender :  Not reported
Min Weight :  Not reported
Max Weight :  Not reported
Development :  tadpole
Primary Brain Region :  retina
Secondary Brain Region :  Not reported
Tertiary Brain Region :  Not reported
Primary Cell Class :  principal cell
Secondary Cell Class :  ganglion
Tertiary Cell Class :  Not reported
Original Format :  Neuromantic.swc
Experiment Protocol :  in vivo
Experimental Condition :  DSCAM downregulation
Staining Method :  Alexa Fluor 488 - Dextran
Slicing Direction :  horizontal
Slice Thickness :  1  μm
Tissue Shrinkage :  Not reported
Objective Type :  water
Magnification :  63x
Reconstruction Method :  Neuromantic
Date of Deposition :  2019-04-11
Date of Upload :  2019-08-19
Persistence Vector :  Axon-031116-DSCAM-T2A-Day-2-scaled-smooth.pvec
Note :  Embryonic stage 45. Imaging started 5 days post fertilization. Co-labeled by single-cell electroporation with Lissamine-tagged morpholino

Reference Article
Related Article Reference :  DSCAM differentially modulates pre- and postsynaptic structural and functional central connectivity during visual system wiring.

Measurements
Soma Surface :  6.44 μm2
Number of Stems :  1
Number of Bifurcations :  30
Number of Branches :  61
Overall Width :  34.46 μm
Overall Height :  116.31 μm
Overall Depth :  23 μm
Average Diameter :  1.04 μm
Total Length :  448.02 μm
Total Surface :  1533.02 μm2
Total Volume :  504.05 μm3
Max Euclidean Distance :  130.79 μm
Max Path Distance :  169.98 μm
Max Branch Order :  16
Average Contraction :  0.9
Total Fragmentation :  263
Partition Asymmetry :  0.69
Average Rall's Ratio :  2.49
Average Bifurcation Angle Local :  76.96°
Average Bifurcation Angle Remote :  83.54°
Fractal Dimension :  1.05

© Copyright 2006-2025   George Mason University All Rights Reserved.   Link Graphic to NIF website