|
| Details about selected cell |
| NeuroMorpho.Org ID : | NMO_194104 |
| Cell Name : | AL080_stamp_2020_01_22_13_26 |
| Archive Name : | Petersen |
| Species Name : | mouse |
| Strain : | C57BL/6J |
| Structural Domains : | Dendrites, Soma, Axon |
| Physical Integrity : | Dendrites Complete, Axon Moderate |
| Morphological Attributes : | No Diameter, 3D, Angles |
| Min Age : | 42.0 days
|
| Max Age : | 63.0 days
|
| Gender : |
Male/Female
|
| Min Weight : | Not reported
|
| Max Weight : | Not reported
|
| Development : | adult |
| Primary Brain Region : | neocortex |
| Secondary Brain Region : | somatosensory |
| Tertiary Brain Region : | primary somatosensory, barrel, layer 2-3 |
| Primary Cell Class : | principal cell |
| Secondary Cell Class : | Excitatory |
| Tertiary Cell Class : | Not reported |
| Original Format : | Vaa3D.eswc |
| Experiment Protocol : | in vivo |
| Experimental Condition : | Control |
| Staining Method : | enhanced green fluorescent protein |
| Slicing Direction : | coronal |
| Slice Thickness : | 100
μm |
| Tissue Shrinkage : |
Not reported
|
| Objective Type : | water |
| Magnification : | 16x |
| Reconstruction Method : | Vaa3D |
| Date of Deposition : | 2022-05-16 |
| Date of Upload : | 2022-07-25 |
| Persistence Vector : | AL080_stamp_2020_01_22_13_26.pvec |
| Note : | The two-photon optical sections are 5 microns apart. |
|
|
| Reference Article |
| Related Article Reference : | Axonal and Dendritic Morphology of Excitatory Neurons in Layer 2/3 Mouse Barrel Cortex Imaged Through Whole-Brain Two-Photon Tomography and Registered to a Digital Brain Atlas. |
|
|
|
|
| Measurements |
| Soma Surface : |
1189.86 μm2 |
| Number of Stems : |
5 |
| Number of Bifurcations : |
306 |
| Number of Branches : |
617 |
| Overall Width : |
3043.8 μm |
| Overall Height : |
2602.74 μm |
| Overall Depth : |
1169.36 μm |
| Average Diameter : |
2 μm |
| Total Length : |
69893 μm |
| Total Surface : |
439151 μm2 |
| Total Volume : |
219575 μm3 |
| Max Euclidean Distance : |
2961.28 μm |
| Max Path Distance : |
5923.25 μm |
| Max Branch Order : |
29 |
| Average Contraction : |
0.83 |
| Total Fragmentation : |
13218 |
| Partition Asymmetry : |
0.69 |
| Average Rall's Ratio : |
2 |
| Average Bifurcation Angle Local : |
72.99° |
| Average Bifurcation Angle Remote : |
77.34° |
| Fractal Dimension : |
1.07 |
|
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