8.6.96 - Released: 2025-11-05 - Content: 284158 cells
Morphology File (Standardized)
Morphology File (Original)
Log File (Standardized)
Log File (Original)



3D Cell Viewer - Java, legacy
3D Cell Viewer - WebGL, novel
Animation
Similar Neurons
Details about selected cell
NeuroMorpho.Org ID :  NMO_159587
Cell Name :  AD0603-Ect-R-7601-fiber02
Archive Name :  Zhang_Jiang
Species Name :  mouse
Strain :  3 x Tg-AD
Structural Domains :  Dendrites, Soma, No Axon
Physical Integrity :  Dendrites Complete
Morphological Attributes :  No Diameter, 3D, Angles
Min Age :  6.0 months
Max Age :  6.0 months
Gender :  Male
Min Weight :  Not reported
Max Weight :  Not reported
Development :  adult
Primary Brain Region :  entorhinal cortex
Secondary Brain Region :  right
Tertiary Brain Region :  Not reported
Primary Cell Class :  principal cell
Secondary Cell Class :  pyramidal
Tertiary Cell Class :  Not reported
Original Format :  Amira.swc
Experiment Protocol :  in vitro
Experimental Condition :  Control
Staining Method :  Golgi-Cox
Slicing Direction :  coronal
Slice Thickness :  50  μm
Tissue Shrinkage :  Not reported
Objective Type :  Not reported
Magnification :  40x
Reconstruction Method :  Amira
Date of Deposition :  2020-01-31
Date of Upload :  2021-07-16
Persistence Vector :  AD0603-Ect-R-7601-fiber02.pvec
Note :  A block size of 600 x 600 x 600 cubic micrometers was chosen in the brain for statistical analysis of the parameters of neuronal morphology. The position of the entorhinal cortex was located in the following stereotaxic coordinates: Bregma, -4.04; -5.02 mm.

Reference Article
Related Article Reference :  Dendritic complexity change in the triple transgenic mouse model of Alzheimer's disease.

Measurements
Soma Surface :  44.01 μm2
Number of Stems :  7
Number of Bifurcations :  6
Number of Branches :  19
Overall Width :  68.68 μm
Overall Height :  154.22 μm
Overall Depth :  44.03 μm
Average Diameter :  1.06 μm
Total Length :  642.39 μm
Total Surface :  2207.91 μm2
Total Volume :  864.79 μm3
Max Euclidean Distance :  120.51 μm
Max Path Distance :  188.66 μm
Max Branch Order :  2
Average Contraction :  0.81
Total Fragmentation :  1254
Partition Asymmetry :  0.33
Average Rall's Ratio :  10.46
Average Bifurcation Angle Local :  45.67°
Average Bifurcation Angle Remote :  66.05°
Fractal Dimension :  1.08

© Copyright 2006-2025   George Mason University All Rights Reserved.   Link Graphic to NIF website