8.6.96 - Released: 2025-11-05 - Content: 284158 cells
Morphology File (Standardized)
Morphology File (Original)
Log File (Standardized)
Log File (Original)



3D Cell Viewer - Java, legacy
3D Cell Viewer - WebGL, novel
Animation
Similar Neurons
Details about selected cell
NeuroMorpho.Org ID :  NMO_159439
Cell Name :  AD0601-PMC-R-5301-fiber14
Archive Name :  Zhang_Jiang
Species Name :  mouse
Strain :  3 x Tg-AD
Structural Domains :  Dendrites, Soma, No Axon
Physical Integrity :  Dendrites Complete
Morphological Attributes :  No Diameter, 3D, Angles
Min Age :  6.0 months
Max Age :  6.0 months
Gender :  Male
Min Weight :  Not reported
Max Weight :  Not reported
Development :  adult
Primary Brain Region :  neocortex
Secondary Brain Region :  frontal
Tertiary Brain Region :  primary motor, right
Primary Cell Class :  principal cell
Secondary Cell Class :  pyramidal
Tertiary Cell Class :  Not reported
Original Format :  Amira.swc
Experiment Protocol :  in vitro
Experimental Condition :  Control
Staining Method :  Golgi-Cox
Slicing Direction :  coronal
Slice Thickness :  50  μm
Tissue Shrinkage :  Not reported
Objective Type :  Not reported
Magnification :  40x
Reconstruction Method :  Amira
Date of Deposition :  2020-01-31
Date of Upload :  2021-07-16
Persistence Vector :  AD0601-PMC-R-5301-fiber14.pvec
Note :  A block size of 600 x 600 x 600 cubic micrometers was chosen in the brain for statistical analysis of the parameters of neuronal morphology. The position of the primary motor cortex was located in the following stereotaxic coordinates: Bregma, 2.34; -1.22 mm.

Reference Article
Related Article Reference :  Dendritic complexity change in the triple transgenic mouse model of Alzheimer's disease.

Measurements
Soma Surface :  965.85 μm2
Number of Stems :  5
Number of Bifurcations :  0
Number of Branches :  5
Overall Width :  162.18 μm
Overall Height :  239.27 μm
Overall Depth :  31.34 μm
Average Diameter :  2.11 μm
Total Length :  624.01 μm
Total Surface :  4205.11 μm2
Total Volume :  2313.03 μm3
Max Euclidean Distance :  181.57 μm
Max Path Distance :  211.69 μm
Max Branch Order :  0
Average Contraction :  0.9
Total Fragmentation :  98
Partition Asymmetry :  0
Average Rall's Ratio :  0
Average Bifurcation Angle Local : 
Average Bifurcation Angle Remote : 
Fractal Dimension :  1.02

© Copyright 2006-2025   George Mason University All Rights Reserved.   Link Graphic to NIF website