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| Details about selected cell |
| NeuroMorpho.Org ID : | NMO_34869 |
| Cell Name : | AB-NL-PC-01 |
| Archive Name : | Blackman,Sjostrom |
| Species Name : | mouse |
| Strain : | C57BL/6 |
| Structural Domains : | Dendrites, Soma, Axon |
| Physical Integrity : | Dendrites Complete, Axon Moderate |
| Morphological Attributes : | Diameter, 3D, Angles |
| Min Age : | 12.0 days
|
| Max Age : | 20.0 days
|
| Gender : |
Not reported
|
| Min Weight : | Not reported
|
| Max Weight : | Not reported
|
| Development : | young |
| Primary Brain Region : | neocortex |
| Secondary Brain Region : | occipital |
| Tertiary Brain Region : | primary visual, layer 5 |
| Primary Cell Class : | principal cell |
| Secondary Cell Class : | pyramidal |
| Tertiary Cell Class : | Not reported |
| Original Format : | Neurolucida.swc |
| Experiment Protocol : | in vitro |
| Experimental Condition : | Control |
| Staining Method : | biocytin |
| Slicing Direction : | custom |
| Slice Thickness : | 300
μm |
| Tissue Shrinkage : |
Not reported
|
| Objective Type : | oil |
| Magnification : | 100x |
| Reconstruction Method : | Neurolucida |
| Date of Deposition : | 2014-09-13 |
| Date of Upload : | 2016-03-04 |
| Persistence Vector : | AB-NL-PC-01.pvec |
| Note : | Slicing direction is near-coronal.
Alternative reconstruction of this cell was traced with Neuromantic software and is available here. |
|
|
| Reference Article |
| Related Article Reference : | A comparison of manual neuronal reconstruction from biocytin histology or 2-photon imaging: morphometry and computer modeling. |
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|
| Measurements |
| Soma Surface : |
2437.07 μm2 |
| Number of Stems : |
11 |
| Number of Bifurcations : |
95 |
| Number of Branches : |
201 |
| Overall Width : |
454.33 μm |
| Overall Height : |
1253.09 μm |
| Overall Depth : |
43.28 μm |
| Average Diameter : |
0.8 μm |
| Total Length : |
14910.7 μm |
| Total Surface : |
35897.5 μm2 |
| Total Volume : |
7467.96 μm3 |
| Max Euclidean Distance : |
770.25 μm |
| Max Path Distance : |
1236.63 μm |
| Max Branch Order : |
27 |
| Average Contraction : |
0.93 |
| Total Fragmentation : |
4262 |
| Partition Asymmetry : |
0.57 |
| Average Rall's Ratio : |
1.7 |
| Average Bifurcation Angle Local : |
86.2° |
| Average Bifurcation Angle Remote : |
78.29° |
| Fractal Dimension : |
1.01 |
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