8.6.79 - Released: 2025-04-16 - Content: 273841 cells
Morphology File (Standardized)
Morphology File (Original)
Log File (Standardized)
Log File (Original)



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NeuroMorpho.Org ID :  NMO_122069
Cell Name :  AA0448
Archive Name :  MouseLight
Species Name :  mouse
Strain :  C57BL/6
Structural Domains :  Dendrites, Soma, Axon
Physical Integrity :  Dendrites Moderate, Axon Complete
Morphological Attributes :  No Diameter, 3D, Angles
Min Age :  2.0 months
Max Age :  2.0 months
Gender :  Female
Min Weight :  25 grams
Max Weight :  25 grams
Development :  adult
Primary Brain Region :  thalamus
Secondary Brain Region :  Ventral medial nucleus
Tertiary Brain Region :  Not reported
Primary Cell Class :  principal cell
Secondary Cell Class :  projection
Tertiary Cell Class :  Not reported
Original Format :  Janelia Workstation-Large Volume Viewer.swc
Experiment Protocol :  in vivo
Experimental Condition :  Control
Staining Method :  enhanced green fluorescent protein
Slicing Direction :  coronal
Slice Thickness :  25  μm
Tissue Shrinkage :  Not reported
Objective Type :  oil
Magnification :  40x
Reconstruction Method :  Janelia Workstation-Large Volume Viewer
Date of Deposition :  2019-10-02
Date of Upload :  2019-12-13
Persistence Vector :  AA0448.pvec

Reference Article
Related Article Reference :  Reconstruction of 1000 Projection Neurons Reveals New Cell Types and Organization of Long-Range Connectivity in the Mouse Brain

Measurements
Soma Surface :  12.43 μm2
Number of Stems :  7
Number of Bifurcations :  122
Number of Branches :  251
Overall Width :  3959.31 μm
Overall Height :  3353.63 μm
Overall Depth :  4733.51 μm
Average Diameter :  0.25 μm
Total Length :  74273.9 μm
Total Surface :  58334.6 μm2
Total Volume :  3645.91 μm3
Max Euclidean Distance :  5668.99 μm
Max Path Distance :  11870.6 μm
Max Branch Order :  13
Average Contraction :  0.94
Total Fragmentation :  2478
Partition Asymmetry :  0.51
Average Rall's Ratio :  2
Average Bifurcation Angle Local :  68.05°
Average Bifurcation Angle Remote :  61.33°
Fractal Dimension :  1.02

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