8.6.82 - Released: 2025-05-21 - Content: 275062 cells
Morphology File (Standardized)
Morphology File (Original)
Log File (Standardized)
Log File (Original)



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Details about selected cell
NeuroMorpho.Org ID :  NMO_85050
Cell Name :  AA0204
Archive Name :  MouseLight
Species Name :  mouse
Strain :  C57BL/6
Structural Domains :  Dendrites, Soma, Axon
Physical Integrity :  Dendrites Moderate, Axon Complete
Morphological Attributes :  No Diameter, 3D, Angles
Min Age :  6.0 months
Max Age :  6.0 months
Gender :  Female
Min Weight :  25 grams
Max Weight :  25 grams
Development :  adult
Primary Brain Region :  hypothalamus
Secondary Brain Region :  lateral hypothalamic area
Tertiary Brain Region :  Not reported
Primary Cell Class :  principal cell
Secondary Cell Class :  projection
Tertiary Cell Class :  Not reported
Original Format :  Janelia Workstation-Large Volume Viewer.swc
Experiment Protocol :  in vivo
Experimental Condition :  Control
Staining Method :  enhanced green fluorescent protein
Slicing Direction :  coronal
Slice Thickness :  25  μm
Tissue Shrinkage :  Not reported
Objective Type :  oil
Magnification :  40x
Reconstruction Method :  Janelia Workstation-Large Volume Viewer
Date of Deposition :  2017-11-03
Date of Upload :  2018-04-16
Persistence Vector :  AA0204.pvec
Note :  imaged at ~0.3 x 0.3 x 1 micron resolution with physical overlap in x, y, and z between imaged volumes

Reference Article
Related Article Reference :  Long distance projections of cortical pyramidal neurons.

Measurements
Soma Surface :  12.19 μm2
Number of Stems :  7
Number of Bifurcations :  461
Number of Branches :  929
Overall Width :  2635.57 μm
Overall Height :  3510.99 μm
Overall Depth :  3639.27 μm
Average Diameter :  2 μm
Total Length :  104481 μm
Total Surface :  656474 μm2
Total Volume :  328237 μm3
Max Euclidean Distance :  3476.15 μm
Max Path Distance :  9387.41 μm
Max Branch Order :  46
Average Contraction :  0.89
Total Fragmentation :  8864
Partition Asymmetry :  0.63
Average Rall's Ratio :  2
Average Bifurcation Angle Local :  79.93°
Average Bifurcation Angle Remote :  76.61°
Fractal Dimension :  1.03

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