8.6.82 - Released: 2025-05-21 - Content: 275062 cells
Morphology File (Standardized)
Morphology File (Original)
Log File (Standardized)
Log File (Original)



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Details about selected cell
NeuroMorpho.Org ID :  NMO_85188
Cell Name :  AA0171
Archive Name :  MouseLight
Species Name :  mouse
Strain :  C57BL/6
Structural Domains :  Dendrites, Soma, Axon
Physical Integrity :  Dendrites Moderate, Axon Complete
Morphological Attributes :  Diameter, 3D, Angles
Min Age :  6.0 months
Max Age :  6.0 months
Gender :  Female
Min Weight :  25 grams
Max Weight :  25 grams
Development :  adult
Primary Brain Region :  neocortex
Secondary Brain Region :  presubiculum
Tertiary Brain Region :  Not reported
Primary Cell Class :  principal cell
Secondary Cell Class :  projection
Tertiary Cell Class :  Not reported
Original Format :  Janelia Workstation-Large Volume Viewer.swc
Experiment Protocol :  in vivo
Experimental Condition :  Control
Staining Method :  enhanced green fluorescent protein
Slicing Direction :  coronal
Slice Thickness :  25  μm
Tissue Shrinkage :  Not reported
Objective Type :  oil
Magnification :  40x
Reconstruction Method :  Janelia Workstation-Large Volume Viewer
Date of Deposition :  2017-11-03
Date of Upload :  2018-04-16
Persistence Vector :  AA0171.pvec
Note :  imaged at ~0.3 x 0.3 x 1 micron resolution with physical overlap in x, y, and z between imaged volumes

Reference Article
Related Article Reference :  Long distance projections of cortical pyramidal neurons.

Measurements
Soma Surface :  12.27 μm2
Number of Stems :  7
Number of Bifurcations :  35
Number of Branches :  77
Overall Width :  3182.82 μm
Overall Height :  2464.78 μm
Overall Depth :  6392.45 μm
Average Diameter :  1.75 μm
Total Length :  24198.7 μm
Total Surface :  137071 μm2
Total Volume :  64792.1 μm3
Max Euclidean Distance :  5853.94 μm
Max Path Distance :  14856.6 μm
Max Branch Order :  17
Average Contraction :  0.92
Total Fragmentation :  995
Partition Asymmetry :  0.69
Average Rall's Ratio :  2
Average Bifurcation Angle Local :  65.67°
Average Bifurcation Angle Remote :  57.17°
Fractal Dimension :  1.02

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